Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi236g00033 ATGTCATCTTTCCCTAATTCGGTCTCCGATGGCCGGAAGTCCGGCAAGGCACCGGAGAAGTCCAATTTCTCACAAACTTGTAGCCTCCTCAGCCAGTTCTTGAAGGAGAAGCGCATCTCTGGAGATTCTACCCCTGGAATTGCTGCCAAAATGGACCCTAGAGCAAGTACGAAAGATTTGTTAGCCAATCTACAAAAACCAGATGGGACTTTGAGACTACACGCATCTGCTATGGATTCCCTTCCCCAGCTTGTGGAAAACCCCTGCATTAAGAAGTCTAATGATAGGTCATCAGGGTCTGAAACTCCCCAAATGACAATATTCTATTGCGGAAAAATGTTAGTATTTGATGGCTTTCCACCAGAGAAGGCAACAGAGGTAATGGAATTAGCCACCAAGTTAGCCTCTGACACTTCTAACCCTGAAGAAAAAAACCCCCCAAGTGCTCCAGTCACTACTGAAAAATTGAACGAATCCAAAGCACCACAAACAAACACTGCCTCTGCCTCAGAAACCCCTCGACCAGCTGTTGGTTCAGATATGAGGTATCCAAGGAGAGCTTCACTTCTAAAATTTCTTGAGAAGAGGAAAGAAAGGGTTATTGCTAGAGGACCTTACCAAATTAATAACCCCAACAACAACCCTAAGCATGAGGGTAGCAGTTCAGGAGGTGAACCTGAAGATCAATGTTCCAAACAATTTGACCTTAACTTGTAG 717 0.4477 MSSFPNSVSDGRKSGKAPEKSNFSQTCSLLSQFLKEKRISGDSTPGIAAKMDPRASTKDLLANLQKPDGTLRLHASAMDSLPQLVENPCIKKSNDRSSGSETPQMTIFYCGKMLVFDGFPPEKATEVMELATKLASDTSNPEEKNPPSAPVTTEKLNESKAPQTNTASASETPRPAVGSDMRYPRRASLLKFLEKRKERVIARGPYQINNPNNNPKHEGSSSGGEPEDQCSKQFDLNL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi236g00033 238 ProSiteProfiles Tify domain profile. 98 133 IPR010399 -
Sebi236g00033 238 MobiDBLite consensus disorder prediction 132 173 - -
Sebi236g00033 238 MobiDBLite consensus disorder prediction 206 238 - -
Sebi236g00033 238 Pfam Jas motif 185 207 IPR018467 -
Sebi236g00033 238 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 215 IPR040390 -
Sebi236g00033 238 Pfam tify domain 101 131 IPR010399 -
Sebi236g00033 238 SMART tify_2 98 133 IPR010399 -
Sebi236g00033 238 MobiDBLite consensus disorder prediction 1 23 - -
Sebi236g00033 238 MobiDBLite consensus disorder prediction 201 238 - -
Sebi236g00033 238 MobiDBLite consensus disorder prediction 128 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi236g00033 Sebi-Chr236 461198 462723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi236g00033 8 222 Tify Gene Family AT1G19180 34.694 2.17e-25 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Sebi236g00033 tify 1.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi236g00033 K13464 - gmx:100778559 338.576