Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi236g00019 ATGGCTAATGAAGGAGGAAAAAGTAATGACTTCTATGCGATCCTGGGCTTGGATAAGGAGTGCACTGAATCAGAGCTAAGGAATGCTTATAAGAAACTTGCACTGAAATGGCACCCAGATCGTTGTTCAGCGTCCGGGAATTTGAAGTTTGTGGAAAAAGCTAAGAAGAAATTCCAGGCAATACAACAAGCCTATTCTGTTTTATCTGACTCAAACAAAAGGTTAATGTACGATGTAGGAGTCTACGACAGTGATGATGACGAAAATGGCATGGGGGACTTCTTGAACGAAATGGTCACAATGATGAGCCAGACTGGTCCAAATGAAAATGGTGAGGAGAGCTTTGAGGAGTCGCAACAGCTGTTTGAAGAGATGTTTCAAGCAGATATTGGATTAGATGGAAGCACATCTCTTTCTGCTGCTGGTTGCTCTACTTCATCAACTTACATGACTTACACTGAAAATTCTAATTCAAACAAACGCAATTCCACTGAGATGAATTTTGGGAAGGCAGAGGATTCTTCTAACTTTGATGCCAATTACCAGAACTTCTGTTTTGGGGTGAAGCACCTCCTAGATGTCGAGAAGGGAAAAGGGGGAATTCCAGAAGGAGGAGGTAACAATAGACATAGAAATGGCAGAAAACAAAAAATCTCATATGGTCATGATGTTTCCTTTAATGATTGCCATGGAATTTCCGCTAAGTAA 708 0.4096 MANEGGKSNDFYAILGLDKECTESELRNAYKKLALKWHPDRCSASGNLKFVEKAKKKFQAIQQAYSVLSDSNKRLMYDVGVYDSDDDENGMGDFLNEMVTMMSQTGPNENGEESFEESQQLFEEMFQADIGLDGSTSLSAAGCSTSSTYMTYTENSNSNKRNSTEMNFGKAEDSSNFDANYQNFCFGVKHLLDVEKGKGGIPEGGGNNRHRNGRKQKISYGHDVSFNDCHGISAK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi236g00019 235 CDD DnaJ 10 70 IPR001623 -
Sebi236g00019 235 SMART dnaj_3 9 73 IPR001623 -
Sebi236g00019 235 SUPERFAMILY Chaperone J-domain 8 93 IPR036869 -
Sebi236g00019 235 PRINTS DnaJ domain signature 53 73 IPR001623 -
Sebi236g00019 235 PRINTS DnaJ domain signature 12 30 IPR001623 -
Sebi236g00019 235 PRINTS DnaJ domain signature 30 45 IPR001623 -
Sebi236g00019 235 PRINTS DnaJ domain signature 73 92 IPR001623 -
Sebi236g00019 235 Pfam DnaJ domain 10 78 IPR001623 -
Sebi236g00019 235 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Sebi236g00019 235 PANTHER PUTATIVE, EXPRESSED-RELATED 3 184 - -
Sebi236g00019 235 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Sebi236g00019 235 Gene3D DnaJ domain 7 135 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi236g00019 Sebi-Chr236 271723 275292 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi236g00019 12 78 C2H2 Transcription Factor Family AT1G74250 41.791 3.62e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi236g00019 - - lang:109338829 359.377