Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi235g00070 ATGGAAGGGAGAGAAGGTATGAGCTCAGGGGTTACAGTGATAGGGGCAGAAGCTCCATCAACCTATCATGTGGCACCAAGGAGTGAAGCTCCAAGCCAGGGTCCTATTCCTGAACCAGGAGCTGCTGCTATTGGTGTCTCACCAGTGAGTGTGGGATTGGATGGTTCAGCAGTTAAGAAGAAAAGGGGTAGACCAAGGAAATATGGACCAGATGGGGCTGTCACTATGGCATTGTCACCATTGCCAATCTCATCTTCAGCTCCATTTTCTAATGACTTTTCATCCGGGAAGCGGGGGAAACCGCGGGCGGTGGAGTACAAGCAGTCCAAAAAAGTTGGAGTGGATCATCTAGGTGAATCTGTTGGTACAAACTTTATGCCACATATCATTACCGTCAATGCTGGAGAGGACATTACAATGAAGGTTATATCTTTTTCCCAGCAAGGACCCCGAGCTATATGCATCCTATCTGCCAATGGTGTAATTTCAAATGTTACTCTTCGTCAGCCTGATTCTTCTGGGGGAACTTTGACCTATGAGGGCCGTTTTGAGATTCTTTCATTGTCTGGATCATTCATGCCTACTGACAACCAAGGAACAAGAAGCAGGTCTGGTGGGATGAGTGTTTCTTTGTCAAGTCCAGACGGTCGCGTTGTCGGTGGTGGAGTTGCTGGTCTTCTTATAGCTGCCAGTCCTGTGCAGGATCACTTAGATGCCTTATGTCCTCAGGTGGTGGTGGGAAGTTTTCTACCAAGCAACCAGCAAGACCAGAAGCCAAAGAAGCCCAAGTCTGATTATGTACCGCCAGTTACTATTACCCCAGCCATTGCAGTGTCTTCTGCACCACCCCCAACTAATGGTGAAAAAGAGGATATAATGGTTGGACATCTACTGCAAAATTCAGGAACCCTTAACCCAAACCTTACTTCTCCTCCCTCAGCCTTCAGAAGAGAAAATTGGGTTAATATGCACTCTATGTCAGACACAATGAAGTCTGCAACTGATATCAACATATCTTTGCCTGATAGTTAA 1032 0.4661 MEGREGMSSGVTVIGAEAPSTYHVAPRSEAPSQGPIPEPGAAAIGVSPVSVGLDGSAVKKKRGRPRKYGPDGAVTMALSPLPISSSAPFSNDFSSGKRGKPRAVEYKQSKKVGVDHLGESVGTNFMPHIITVNAGEDITMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRSGGMSVSLSSPDGRVVGGGVAGLLIAASPVQDHLDALCPQVVVGSFLPSNQQDQKPKKPKSDYVPPVTITPAIAVSSAPPPTNGEKEDIMVGHLLQNSGTLNPNLTSPPSAFRRENWVNMHSMSDTMKSATDINISLPDS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi235g00070 343 CDD DUF296 127 215 IPR005175 -
Sebi235g00070 343 Gene3D - 127 260 - -
Sebi235g00070 343 MobiDBLite consensus disorder prediction 20 47 - -
Sebi235g00070 343 Pfam Plants and Prokaryotes Conserved (PCC) domain 127 234 IPR005175 -
Sebi235g00070 343 SUPERFAMILY AF0104/ALDC/Ptd012-like 125 239 - -
Sebi235g00070 343 FunFam AT-hook motif nuclear-localized protein 1-like 127 266 - -
Sebi235g00070 343 ProSiteProfiles PPC domain profile profile. 122 263 IPR005175 -
Sebi235g00070 343 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 32 317 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi235g00070 Sebi-Chr235 1358822 1362301 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi235g00070 6 281 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 56.090 8.45e-95 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi235g00070 - - gmx:100777213 509.99