Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi235g00058 ATGGCAGAGGGAAAAGGCAGAGTCTGTGTCACTGGAGGAACAGGGTTTCTTGGTTCATGGATCATCAAGAGACTCCTTGAAGATGGTTACTCTGTTAATACCACTATTAGATCTAATCCAGGACGTAAGAGAGATATAAGCTTCCTAACAAATTTACCTGGTGCATCCGAGAAGCTACAGGTTTTCAATGCTGATCTGAGCAACCCAGAAAGTTTTGGTCCTGCAGTTGAAGGGTGTGTTGGGATATTCCACACTGCATCTCCAATTGATTTTGCAGTGAACGAACCAGAGGAAGTAGTTACCAAAAGAACGGTTGATGGAGCATTAGGAATTTTAAAAGCATGTGTAAATTCAAAGACAGTGAAGAGGGTTGTTTACACTTCAAGTGGCTCTGCTGTTTCCTTCAGTGGTGCAGAGGGTGATGTATTGGATGAGAGTAGTTGGAGTAATGTGGATTTGCTTAGAAGTGTGAAACCATTTGGTTGGTCATATGGAGTTTCCAAGACCTTGGCAGAGAAAGCTGTCCTTGAATTTGGGGAACAAAATGGGATTGATGTTGTCACTTTGATACCTACTTTTGTTGTTGGAAGATGGGTTTGTCCTAAGCTTCCTGACTCTGTTGAGAAAGCTCTCGTTTTGGTATTAGGCAAAAAGGACCAAATTAATGTCACTCGTTACCATATGGTACATGTGGATGATGTGGCTAGAGCACATATATTCCTGCTTGAGCATCCTAATGCAAAAGGGAGATTTAATTGCTCACCATTCATTGTATCTATTGAAGAGATGTCTGAACTTCTTTCAGCCAAATACCCTGAATTTCAAATACCAACAGTAGACGAGGTGAAGGAAATTAAAGGTGTCAAGTTACCACATTTGATCTCGAAGAAACTAGTGGATGCTGGTTTCGAGTTCAAGTATAGCGTTGAGGATATGTTTGACGATGCAATTCAATGCTGCAAGGAAAATGGTTATCTTTAA 981 0.4088 MAEGKGRVCVTGGTGFLGSWIIKRLLEDGYSVNTTIRSNPGRKRDISFLTNLPGASEKLQVFNADLSNPESFGPAVEGCVGIFHTASPIDFAVNEPEEVVTKRTVDGALGILKACVNSKTVKRVVYTSSGSAVSFSGAEGDVLDESSWSNVDLLRSVKPFGWSYGVSKTLAEKAVLEFGEQNGIDVVTLIPTFVVGRWVCPKLPDSVEKALVLVLGKKDQINVTRYHMVHVDDVARAHIFLLEHPNAKGRFNCSPFIVSIEEMSELLSAKYPEFQIPTVDEVKEIKGVKLPHLISKKLVDAGFEFKYSVEDMFDDAIQCCKENGYL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi235g00058 326 CDD FR_SDR_e 8 303 - -
Sebi235g00058 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 324 IPR036291 -
Sebi235g00058 326 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 317 - -
Sebi235g00058 326 FunFam Dihydroflavonol reductase 5 326 - -
Sebi235g00058 326 Gene3D - 5 326 - -
Sebi235g00058 326 Pfam NAD dependent epimerase/dehydratase family 8 252 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi235g00058 Sebi-Chr235 1173856 1175798 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi235g00058 4 326 Monolignol Biosynthesis Gene Families AT2G02400 37.003 8.28e-61 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi235g00058 - K13265 gmx:100194416 559.681