Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi234g00059 ATGATTCATCAGAACCCTCAAATACTATTTTCTGATATTGATAAAACCCTGAGACCAAAAATTGAGTTCTTTCAACTATTGGGTTTTGAGGGTTCTGATGAGTTATGCAAGTTTATATCCAAGAATTCAAGTGTTTTGAATGCTAGTTTGGAAAAAACATTGGTCCCCTCTGTGGAAACTATTAGGAAAATTATGTGCAATGAGAAACATTTTATTCAAGTTTTGCACAAATCTGGTGGCTGGATTCTCCCGAGGTACCAAAAATTTTTGGTCAACATTTCCTTCTTAGAGAGTTGTGGCATTGTTGGGTCTCAGGTTGCAATGCTACTCAAACGACAGTCAAGAATTTTGACTGCATCACAATCTTCTCTTAGAAACCATGTTTCGCGTGCTGTAGACTTGGGTTTCCATGTAAATTCAAGAATGTTGGTCCATGCGCTCTATACTTTAAGTTCTTTGAGCTACAAAACATTCAGGAGAAAGCTGGAGCTAATTCAGTACTTTGGGTTTTCCAAAGATGAGAGCCTGACAATGTTCCAAAAGGCTCCATATTTGGGTGGGGTATCGGAGAAGAAATTAAAGGTTGGAATGGAATTCTTCTTGCATACAGCTATGCTGCCAAAGTCAGTGTTGGTTCATCAGCCTAAGTTTTTAATGTATAGCATGGAGGGTCGAGTGCTTCCAAGATATAGAGTTTTTCAGCTCGTAATATCAAGAAATCTATGTAAGAAGGCCCCCAGTTATATTTATTTGTTAAGTTTGTCTGAGGAGGTGTTCTTGGACAAGTATATATCACAGTTCAGACAAAACGCGGAGGCATTATTGGTAGCTTACAAAGGTCACAAGGGTCATTATCTGAAAGCATAA 867 0.3829 MIHQNPQILFSDIDKTLRPKIEFFQLLGFEGSDELCKFISKNSSVLNASLEKTLVPSVETIRKIMCNEKHFIQVLHKSGGWILPRYQKFLVNISFLESCGIVGSQVAMLLKRQSRILTASQSSLRNHVSRAVDLGFHVNSRMLVHALYTLSSLSYKTFRRKLELIQYFGFSKDESLTMFQKAPYLGGVSEKKLKVGMEFFLHTAMLPKSVLVHQPKFLMYSMEGRVLPRYRVFQLVISRNLCKKAPSYIYLLSLSEEVFLDKYISQFRQNAEALLVAYKGHKGHYLKA 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi234g00059 288 Gene3D Transcription termination factor 3, mitochondrial 62 270 IPR038538 -
Sebi234g00059 288 FunFam Mitochondrial transcription termination factor-like 50 271 - -
Sebi234g00059 288 PANTHER CGI-12 PROTEIN-RELATED 2 266 IPR003690 GO:0003690|GO:0006355
Sebi234g00059 288 SMART mt_12 36 67 IPR003690 GO:0003690|GO:0006355
Sebi234g00059 288 SMART mt_12 208 240 IPR003690 GO:0003690|GO:0006355
Sebi234g00059 288 SMART mt_12 176 207 IPR003690 GO:0003690|GO:0006355
Sebi234g00059 288 SMART mt_12 141 171 IPR003690 GO:0003690|GO:0006355
Sebi234g00059 288 SMART mt_12 1 30 IPR003690 GO:0003690|GO:0006355
Sebi234g00059 288 SMART mt_12 107 137 IPR003690 GO:0003690|GO:0006355
Sebi234g00059 288 Pfam mTERF 152 260 IPR003690 GO:0003690|GO:0006355
Sebi234g00059 288 Pfam mTERF 1 128 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi234g00059 Sebi-Chr234 697696 698562 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sebi234g00059 mTERF 5.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi234g00059 K15031 - vvi:100268158 293.893