Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi234g00058 ATGCCCTTTCCAGGTACAAGCGTTGGAAGGCGAAGAAACACAGAGATTGTAAAAGGAGAAGCGTGTTCCATGAACAGTGTCTTACGTTGTCCACATGGGTGCGGGCCCTTCGTTTTCTACAGTGTTGTTCCAAACCAGTGTACCACTCCACTACTACTCTCACACCCTCTTCTTGGGCACGAGAATCATGGAGTTCATGTATGTCACAAATGTGGATGGCCCTTTCCGAATCCACATCCAAGTGCCAAACATAGGCGTGCTCACAAGAAGATCTGTGGAACCATTGAAGGTTACAAACTGTGTGTCTCTGAGGGACAAACTCATTTGCACGGTTCAGATGATGAACATGTTTCTGATGATGATCACAAAACACCAGGTTTGGTTGTGTTAGGTTCAAACGCCTTGGACACAGGCAACAATGTGAAGGGTAATGATGGAAATGGAGAAAAAATAATTAGATCAGAAGATGAGGTGTTTTCAGATGCAGTTGCAGACTTTTTGGATAGTGGACTAAGTCCAGGAAATAAGGAACCTTTGCAAAAAGATAGTTTGGATACAGATACTGATGTGGAAAAAGTGGACACTAAAGAACAAAAATTTTCAGGGTCTTCGGAGCACAATGATTTTAATGATGAGAGTCAGTTAATTGTGAAGTCAAGCAATGACTGCCAAATTGAAAATCCTAAACTTTTGCAAAGTGAAAGTGTTGGAGTGGGAAACACAGTGGAGTTGCAAGGTCAATTGTCAGGCTCTGCTGTGGATCCATTAGCAAGTTCAGTTGCAGATTTGAGGACTGAAGAATTGACTATTGTGCGTGGTGATGATTATTTAGGTTTGTCAAGAGACTCACATCCCAGCAAAGCTGAACCCATGCCAGATGTATTGCCTGAGAAAAATGTCTATGCTGGTGAAAATGTGAGAAATTGCGATTTGATATATGTTGTAAAGGAGACTAATTTGCAAGAAAAGGATGAGATAATATCAGAAAGAAATGTGGTTGAAGTTGTGGACTCATCTGATGATGTTGTAGGTGAAACATGTGAAGGAGTGTCTGCAACAGCAGTTAGTGATGCAGTTTCCTTGGATCATCAAGTGGGTGATGGAGCTGTTGATCTGAAGGAAAAGAACAGTGCTGAGTTTCATTCTTTGCTAGCCCAAGATGACCTTCATCTTGAGTTAAACTCATCTGTAATCACAAATGATGCACAGGTAGAATCTGCTCATGTGATGCAATTTGCTACTTCCAGTGATGTCAAAATTTTGCAGGAAAAGCGAGGAAATGTTAATATTGATCCACTTCGTATACATGATGATAGACCTGATGTAACACGTCCTCAATGTGAGTATGAAGATTTTAAAAATCAGGATAGAGTGGTCTCCCAAGATCCTTTAAGCCTACACTCACCTGGGTCATTGAAACACGTGGAAGATGAATCAAAGGATCCAGGTGCTGAGGAAAATAATTTTCATTTCAACACAAACCAATTGAGTGAAAAAAGTGATGTCCTCTCTTCAGATATGCATGATATGGATAGTAGCATGAAGACAGAGCAGGTCAACAGTGAGTCTATGACTGAAGACAAGCATGCTGAAGATTGCACTGAAGTTTCTACAGTCAAGCTCACAGTTGAAAGTTATCAAATATCGCATGAAATTGGAGCATCTAAGAATGCTTTGAAAACTGAGGTGAATGAGAATCATATGGTTCACTTTTCTGAAGAGCAGGGACCTAATGATACTTGTGAAATTACACAACAGATAAGTTTACCTGAAGGTAGATTAATGGCCTCATCAAATGAGAGTCACAGGGATGCATCCATTGGGTCTGCAATCAGTGAAACAACTAGTGAAATTACTACAGACACTATAAGCCATCATGAGAAAAACAGAACTGAAATAAATGATGTAACTGTAGATGGCAAGGGTGTCAGAGCTAATGTGGAAAATGACACTGAAATTATATTGAAAGATCTTCAACCCAGTGACCTCTTGCAATCAGAAGTCAATAAATCAAGTGACTTATTGAGGAGTGATGATGGTGGAGAAATGGGTAAAATTGAACAATGTGATATAATTGATGCTCAATGTAAAGAAAGGAACACTGAGAGAGATACTTCATCACCTAAATTTGCTAGCAGTCACTTTGAAAGCCCAGTTATTTTGGATGCTGTAATTGCTGAGTCTGTGAGAAAGTCTAATGGTACAGAATGTGCAAATATAGATTCACTATCAGCTGCCCAGGAAAAAGAAGATGAAATCAATAGCAATATCAAAATAAATGAAGAATATAACAGATCTGATGGTACTTCTATTGATTCACATGAAGTACAGGATGCAGAACTATCAGTGAAGGTTGCAGAAGACCTTGCCACAAAGTATGCATCAGTTTCTTTAAATGCTGAGCCTTCTGCTCAACATGGTTCTGCTGTTGAAGATAATCCAGGTGGAGAGCCTGGTAGGGAAATGTCTGGGATTAGTGCTGTGCCTGTTCAAGATCAAAGTGGCGGTAATAACTTGGTTAAACATGGTTCATCTGGATTTGATGCTTCAGTTGACTCTGGTAGCCGGTGTGACAGTTTGGAGGGCAACTGGGGCTCTGTTTCAGTTCTTTCAATGCAATCCGATGCACCAGCTGTTATTGATGCTGAAAATTTATCATCAACTGGTTTGCTGACATCAACAGAAGCAGGGAAATCAAACCAGAACAACCCAGAAGCTGCATCTGAGAAACAGCAATCTGGAAAATCAGAAATGTTTGAACCACCGTCTTTCATGACATTGGTTGAATCTAGCCATGTGGTTAACCCTAAAGGTGCTTCCTCTGAAGTCCAGAGCCGACAACAGCCAAATTCCACTTCACAGGCTGGTTGGTTTCCCACTCTAACTCAGGTTATGAATGAGTCACAAGGGAGAAAGAAGAATGAAGAAATAATAGCCAAGGTAACAAACTGGAGCACCAGTAAGGAACACACACCTCTGAAGAGCCTATTGGGTGAGCCAATCCATAGCAACAACCCCAAATCTCCAAAAGTTGAAGAAAATTCAGTGAATCCGAAGAACGGTAAAGTTTCAGAAAATAATGGTTCTGGACTGACAACTGTCAACTCCATTCTGGGTCCTGAATCCCCTACAGCTCAATTGGAGAAAGGAGATGCTGCAAAAGAATGGAACTCTCCAGCAAGATATCCTGCAGACATCAAGAGAGAAAAAAGGAAATTCAAGAGTAGACCATACTGGATACAATTGGTATGCTGCTCAACGGTGGATCCTCGGCGGAGGTAG 3282 0.4086 MPFPGTSVGRRRNTEIVKGEACSMNSVLRCPHGCGPFVFYSVVPNQCTTPLLLSHPLLGHENHGVHVCHKCGWPFPNPHPSAKHRRAHKKICGTIEGYKLCVSEGQTHLHGSDDEHVSDDDHKTPGLVVLGSNALDTGNNVKGNDGNGEKIIRSEDEVFSDAVADFLDSGLSPGNKEPLQKDSLDTDTDVEKVDTKEQKFSGSSEHNDFNDESQLIVKSSNDCQIENPKLLQSESVGVGNTVELQGQLSGSAVDPLASSVADLRTEELTIVRGDDYLGLSRDSHPSKAEPMPDVLPEKNVYAGENVRNCDLIYVVKETNLQEKDEIISERNVVEVVDSSDDVVGETCEGVSATAVSDAVSLDHQVGDGAVDLKEKNSAEFHSLLAQDDLHLELNSSVITNDAQVESAHVMQFATSSDVKILQEKRGNVNIDPLRIHDDRPDVTRPQCEYEDFKNQDRVVSQDPLSLHSPGSLKHVEDESKDPGAEENNFHFNTNQLSEKSDVLSSDMHDMDSSMKTEQVNSESMTEDKHAEDCTEVSTVKLTVESYQISHEIGASKNALKTEVNENHMVHFSEEQGPNDTCEITQQISLPEGRLMASSNESHRDASIGSAISETTSEITTDTISHHEKNRTEINDVTVDGKGVRANVENDTEIILKDLQPSDLLQSEVNKSSDLLRSDDGGEMGKIEQCDIIDAQCKERNTERDTSSPKFASSHFESPVILDAVIAESVRKSNGTECANIDSLSAAQEKEDEINSNIKINEEYNRSDGTSIDSHEVQDAELSVKVAEDLATKYASVSLNAEPSAQHGSAVEDNPGGEPGREMSGISAVPVQDQSGGNNLVKHGSSGFDASVDSGSRCDSLEGNWGSVSVLSMQSDAPAVIDAENLSSTGLLTSTEAGKSNQNNPEAASEKQQSGKSEMFEPPSFMTLVESSHVVNPKGASSEVQSRQQPNSTSQAGWFPTLTQVMNESQGRKKNEEIIAKVTNWSTSKEHTPLKSLLGEPIHSNNPKSPKVEENSVNPKNGKVSENNGSGLTTVNSILGPESPTAQLEKGDAAKEWNSPARYPADIKREKRKFKSRPYWIQLVCCSTVDPRRR 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi234g00058 1093 MobiDBLite consensus disorder prediction 892 959 - -
Sebi234g00058 1093 MobiDBLite consensus disorder prediction 471 485 - -
Sebi234g00058 1093 MobiDBLite consensus disorder prediction 603 629 - -
Sebi234g00058 1093 MobiDBLite consensus disorder prediction 603 619 - -
Sebi234g00058 1093 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Sebi234g00058 1093 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 57 1088 - -
Sebi234g00058 1093 MobiDBLite consensus disorder prediction 798 844 - -
Sebi234g00058 1093 MobiDBLite consensus disorder prediction 827 844 - -
Sebi234g00058 1093 MobiDBLite consensus disorder prediction 1007 1042 - -
Sebi234g00058 1093 MobiDBLite consensus disorder prediction 451 498 - -
Sebi234g00058 1093 MobiDBLite consensus disorder prediction 169 208 - -
Sebi234g00058 1093 MobiDBLite consensus disorder prediction 928 959 - -
Sebi234g00058 1093 MobiDBLite consensus disorder prediction 180 206 - -
Sebi234g00058 1093 MobiDBLite consensus disorder prediction 989 1058 - -
Sebi234g00058 1093 MobiDBLite consensus disorder prediction 892 919 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi234g00058 Sebi-Chr234 683542 689904 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sebi234g00058 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi234g00058 - - gmx:102665569 1229.54