Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi234g00048 ATGGATATTGATTCAAGAAACTGGAGATGTGGAATAAAGGCCCAATTGCTTGTAACTTCTGTTCTTCTTTTACTGCAAAACTTTCTGGTCATCTCTGAGGTATTTGCAGAGGCAACAAGCTCTGTACATATTGTATACATGGGAGATAAGATATATCCTAATCCAGAAACTACTAAAAAGTATCACCACAAAATGTTATCTTCACTCCTAGGAAGCAAAGAAGCTGCAAAGAATTCAATTCTTTACAGCTATAAGCATGGATTTTCAGGGTTTGCTGCAAGATTGACAAAATCTCAAGCAAAAGAAATAGAAAATTTTCCTGGGGTAGTTTCTGTCATTCCAAATAGAATTCATAAACTCCACACAACCAGAAGCTGGGACTTTTTAGGGATCCATCACTATCATTCCTCCTCCTCAAAAACTGTTTTCACTGAAAGCAACTTAGGTGAAGGAACCATCATAGGTGTCATAGACACAGGCATTTGGCCAGAATCTGCAAGTTTTAATGATGAAGCAATGGGACAAATCCCACCAAGGTGGAAAGGAGTTTGTCAAGTGGGAGAGCACTTCAACACCACCAATTGCAACAAGAAGATAATAGGTGCTAGATGGTTCATGAAAGGAATGAATGATCATACCAAGAATCTCATCCATGGAAAAGACACTAAGGAATATCTCTCAGCTAGAGATGCTATTGGCCATGGCACTCATACAGCTTCAACAGCAGCTGGTTATTTTGTAGGAAATGCAAATTATAAAGGACTTGCTTCTGGTATAGCCAGAGGAGGAGCACCACTGGCTCACATAGCTATCTACAAGGCTTGCTGGGACATTTCAGTTGGAGATTGCACTGATGCTGATATACTGAAAGCTTTTGACAAGGCTATACATGATGGTGTAGATGTCTTAACTGTTTCTCTTGGCTTTGGCATTCCTTTGTTTTCCTATGTTGATCAACGTGACACAATGGCAATTGGTTCATTTCATGCAACTGCCAAGGGAATCACAGTTGTTTGTTCAGCTGGAAATTCTGGTCCAGGGTCTCAAACCATTACAAACACTGCACCATGGATCATTACAGTTGCAGCTACCACAATAGATAGAGCCTTTCCAGCAGCCATTACCCTTGGAAATAACAACACTGTGTGGGGACAGTCCATTGATACTGCAAAACATAATCTTGGATATGTTGGTCTCACATACTCTGAACGCATTGCTCTAGACCCATCAGATGATTTAGCCAAGGATTGTCAATCTGGAAGTCTGAATGAAACAATGGCAGCAGGCAAAATTGTGCTATGCTTTTCAGTATCAGATCAACAGGATATTGTTTCAGCATCCCTTGCAGTAAAGGAAGCTGGAGGAGTTGGACTAATATATGCACAATATCATGAAGATGGACTCAATAATTGTGGTTTATTTCCATGTATCAAGGTGGATTATGAAGTGGGGACACAAATATTAACCTATATTAGAAGAGCAAGGTTTCCAACTGCAAGACTAAGTTTTCCAAAGACTGTTATTGGAAAATGGATATCTCCAAGAGTTGCATCTTTCTCATCTAGAGGACCTAGTACCATGTCTCCAACTGTGCTAAAGCCTGACATAGCTGCACCAGGTGTGGACATTTTGGCAGCATTTCCACCAGATGGCACTACAAAGAGCAGTGGATTTACATTCTTATCTGGAACTTCAATGTCTTGTCCTCATGTAGCTGGAATAGCAGCTCTCATCAAATCCAAACACCCAACTTGGTCACCTGCAGCCATAAGATCAGCTTTAGTAACAACAGCCTCCCAAACTGGCAATGATGGAAACTTTATATCTGAAGAGGGTTCCACACTAAAGGCAGCTGATCCATTTGATATTGGGGGTGGTCATGTGAACCCCAACAAAGCAATGGATCCAGGACTCATATATAATACCACCACTGAGGACTACATCCAGTTCCTATGTTCCATGGGTCATAGTAGTGCTTCCATTAGCAGAGTGACCATGACCACTACAAGTTGTAAGAAAGGAAAACGCCAAGCACTGAACCTTAATCTTCCTTCCATATCAATTCCAAACCTGAAGAGGGCTGCAACAGTGATGAGAACAGTGACAAATGTGGGAAACATAACTGCAGTCTACAGAGCTATGGTGAAGACTCCATATGGTATAAAAGTGAGAGTTGAACCTCAAATTTTGAGTTTCAATTCAGAGACCAAAGTCCTTACCTTCAATGTGAGTTTCCTGTCAACTAAAAAGTTGCATGGAGATTACAAATTTGGAAGCCTAACATGGACAGATGGCAAGCATTTTGTGAGTAGCCCAATAGCTGTGAGGACCATCCAATTTGAATCTAGTTACTGA 2355 0.4089 MDIDSRNWRCGIKAQLLVTSVLLLLQNFLVISEVFAEATSSVHIVYMGDKIYPNPETTKKYHHKMLSSLLGSKEAAKNSILYSYKHGFSGFAARLTKSQAKEIENFPGVVSVIPNRIHKLHTTRSWDFLGIHHYHSSSSKTVFTESNLGEGTIIGVIDTGIWPESASFNDEAMGQIPPRWKGVCQVGEHFNTTNCNKKIIGARWFMKGMNDHTKNLIHGKDTKEYLSARDAIGHGTHTASTAAGYFVGNANYKGLASGIARGGAPLAHIAIYKACWDISVGDCTDADILKAFDKAIHDGVDVLTVSLGFGIPLFSYVDQRDTMAIGSFHATAKGITVVCSAGNSGPGSQTITNTAPWIITVAATTIDRAFPAAITLGNNNTVWGQSIDTAKHNLGYVGLTYSERIALDPSDDLAKDCQSGSLNETMAAGKIVLCFSVSDQQDIVSASLAVKEAGGVGLIYAQYHEDGLNNCGLFPCIKVDYEVGTQILTYIRRARFPTARLSFPKTVIGKWISPRVASFSSRGPSTMSPTVLKPDIAAPGVDILAAFPPDGTTKSSGFTFLSGTSMSCPHVAGIAALIKSKHPTWSPAAIRSALVTTASQTGNDGNFISEEGSTLKAADPFDIGGGHVNPNKAMDPGLIYNTTTEDYIQFLCSMGHSSASISRVTMTTTSCKKGKRQALNLNLPSISIPNLKRAATVMRTVTNVGNITAVYRAMVKTPYGIKVRVEPQILSFNSETKVLTFNVSFLSTKKLHGDYKFGSLTWTDGKHFVSSPIAVRTIQFESSY 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi234g00048 784 Gene3D - 651 778 - -
Sebi234g00048 784 FunFam Subtilisin-like protease SBT1.5 651 778 - -
Sebi234g00048 784 FunFam Subtilisin-like protease SBT5.3 31 121 - -
Sebi234g00048 784 Gene3D Peptidase S8/S53 domain 151 647 IPR036852 GO:0004252|GO:0006508
Sebi234g00048 784 PRINTS Subtilisin serine protease family (S8) signature 230 243 IPR015500 -
Sebi234g00048 784 PRINTS Subtilisin serine protease family (S8) signature 562 578 IPR015500 -
Sebi234g00048 784 PRINTS Subtilisin serine protease family (S8) signature 149 168 IPR015500 -
Sebi234g00048 784 Pfam Subtilase family 149 601 IPR000209 GO:0006508|GO:0008236
Sebi234g00048 784 ProSitePatterns Serine proteases, subtilase family, serine active site. 563 573 IPR023828 -
Sebi234g00048 784 Pfam Peptidase inhibitor I9 42 121 IPR010259 -
Sebi234g00048 784 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 31 121 IPR037045 -
Sebi234g00048 784 Pfam Fibronectin type-III domain 680 775 IPR041469 -
Sebi234g00048 784 CDD PA_subtilisin_like 374 501 - -
Sebi234g00048 784 SUPERFAMILY Subtilisin-like 120 638 IPR036852 GO:0004252|GO:0006508
Sebi234g00048 784 CDD Peptidases_S8_3 118 599 IPR034197 -
Sebi234g00048 784 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 44 775 IPR045051 -
Sebi234g00048 784 FunFam Subtilisin-like protease SBT1.5 151 377 - -
Sebi234g00048 784 Gene3D - 367 508 - -
Sebi234g00048 784 ProSiteProfiles Serine proteases, subtilase domain profile. 125 634 - -
Sebi234g00048 784 FunFam subtilisin-like protease SBT1.5 367 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi234g00048 Sebi-Chr234 567580 571096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi234g00048 36 784 Subtilisin-like Serine Gene Family AT1G32960 51.587 0.0 760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi234g00048 - - gmx:100792709 1350.88