Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi233g00029 ATGTCACCGTCGTCAACCGGAAACTGCAGCAAAATCCGTCGCATTGTTCGTCTCCGGCAAATGCTTCTCCGGTGGCGAACGAAAGCGCGGTTAGCGTCGTCCGATGTCCCGGCAGGACACGTGGCGGTGTGTGTGGGTCCCAGCAGGAGGAGGTTCATCGTGCGCGCTAGTTACCTGAACCACCCGATCTTCAAGAAGCTTCTGGTGATGGCGGAGGAAGAGTACGGCTTCTGCAACCATGGCCCGCTCGCTATCCCTTGCGATGAGTCTCTTTTTGAAGAGCTTCTTCGGGTCATGGCCCGACCCGAACCCAGATCCTCCACGCTCGAAGATTTCCAGAGACGCTGCCACGTGGATATGCGAAGTAGTAGGTTTGAGTTTGGAGGAGGTGAATCATGGCCCTTGCTTCATGACGATCCAATCTGCTGA 429 0.5618 MSPSSTGNCSKIRRIVRLRQMLLRWRTKARLASSDVPAGHVAVCVGPSRRRFIVRASYLNHPIFKKLLVMAEEEYGFCNHGPLAIPCDESLFEELLRVMARPEPRSSTLEDFQRRCHVDMRSSRFEFGGGESWPLLHDDPIC 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi233g00029 142 Pfam Auxin responsive protein 18 98 IPR003676 GO:0009733
Sebi233g00029 142 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi233g00029 Sebi-Chr233 596310 596738 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi233g00029 7 136 Calmodulin-binding Proteins AT4G34750 51.034 3.40e-43 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi233g00029 K14488 - gmx:100795345 207.994