Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi233g00021 ATGGAAAAATCTGATTTTGCATCAAGCATTAATTTGGATGATTACTTGAGTGGATATGATGATGAATTATGTGAGAAAAATGAAAAGGAAGATACTAGTGTAGATGATAATTTCAGAAGGTTGTTTGACTTGTCTGCTGATGAAATTATGTGCCGAGAGTTTGGCAGTGAAGAACAGGCATATGAATTCTATTCATTATATGCAAAACATAATGGGTTTGTTGTTAGGAAAGATGATATAACGAGGGATACTAGGGGGAATCTTATTATGCGTCAGTTTGTTTGCAATAGGGAGAGATTAAGAAACAAGAAGCATTTTATGAGGGTGGATAGGAAGAGAGACCATAGGCTACTTACTCGTACAAATTGTCAAGCTAAGCTTCGTATACACTACCATGAAAAAAGTTTAAAGTGTAAAGTAGTTTCATTTGAGCAGTCTCATAACCATGAGCTTACCCCATCAAGATTAGTGCACCTTCACCCTGCTTACCATCGATTATCAGATATAGATAAGGCGCAAGTTGATACTTTGCAAACATATGGTCTTAGAAGTTGTCACATTATGGGGTACCTAGTGGCTCAAAAAGGGAGTTATTGTCGTGTTGGCTTTATAAAGAAGGACATGTACAACTATCTAGACCGGAAAAATGAAGCAAAGGTTAAGAAAGGGGATGTACGTGCTGTGTTGAGTTACCTACAAGGCAAGGATGACAGTGACCCCCTTTTATATGGGAAGTATTCAACTGGATTTGATGGTAAATTGAAGCGTCTTTTTTGGGCAGATGGAGTTAGTAGATATGATTTTCAAGGTTTTGGTGATATCCTTGCATTTGACACCACATACAAGATGAACAAGTCATATTGTAAGAAGAAAAGTAGCATGGTTGAATTTTTCCACAAGTTTGAGCAGGCGAAGAAGGAGTATAGAAATAATGAGTTGATGACTGAGTTTAAGAATATGTTTTCAGAGCCTGTGCTAACTACATATCTTCGTAGCATTGAGAAAGAGGCTGCTAAATTTTATACACATGAGATTTTCAGAGAAGTTAAGGAAGAGATTGAAAAGGCCAATGCATTAATTGTGACTCAAAGATTAGTTGTTGAGGAGATTTTGAGGCTTTTTGAATGTAGAGGGATTCCATGTTCCCACATCATAACTATGATGAGAAATGAGGATATGGACACCATTCCTCGCAGTTGTTATGCAAACGATGGATGA 1218 0.3703 MEKSDFASSINLDDYLSGYDDELCEKNEKEDTSVDDNFRRLFDLSADEIMCREFGSEEQAYEFYSLYAKHNGFVVRKDDITRDTRGNLIMRQFVCNRERLRNKKHFMRVDRKRDHRLLTRTNCQAKLRIHYHEKSLKCKVVSFEQSHNHELTPSRLVHLHPAYHRLSDIDKAQVDTLQTYGLRSCHIMGYLVAQKGSYCRVGFIKKDMYNYLDRKNEAKVKKGDVRAVLSYLQGKDDSDPLLYGKYSTGFDGKLKRLFWADGVSRYDFQGFGDILAFDTTYKMNKSYCKKKSSMVEFFHKFEQAKKEYRNNELMTEFKNMFSEPVLTTYLRSIEKEAAKFYTHEIFREVKEEIEKANALIVTQRLVVEEILRLFECRGIPCSHIITMMRNEDMDTIPRSCYANDG 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi233g00021 405 PANTHER OS01G0519700 PROTEIN 289 359 - -
Sebi233g00021 405 Pfam FAR1 DNA-binding domain 62 152 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi233g00021 Sebi-Chr233 365416 367219 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi233g00021 FAR1 1.3e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi233g00021 - - ccaj:109792835 343.584