Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi232g00027 ATGAATCTTTCCAAATCAATAATTCCTGTGTTGTTCGAGAAACCTCTGTCCAAGATTTCTGATACAGATGAAGAGAACAGAAAAGATGAGGAAGGCGGAGCATGGATTCGGAATGTCCAGCAACTGTTTGTTATAAGGGATGTCCAGAAACCGTTTGATGTAATGTCTGAAGGAGCAAGTGCATTTGATGGATCTCCTTTTGCTGCTGAGATCAGGCTTATACCCGTTAAGGAGTACATGAAGCTAACCTATCAACCTGTTGTTGGTAACCTGAAAGATATTGCACAAGCATATTGTGATTCTTTTTGTCCCAGAGATGGTGACCAGGATAATGAAGAGAAGGTACCTGAATGGATCATTGTTCCAGGATCATTTGTTGAAATGCAAAAAGGGGATGTGCTAAATCTGTTGGTTATCATATTAGCACACTTGAAGGGAATGGTAGATAATCTTGTTGTGGTTGCCGAGCTAGATGATCTTACTGTTGGTGCCTCGTCCCTTTTATTTGTCTATTCCCTTGATTATACTCGAAATGGTCCCTCTTTGATGCCTGGTGGTTCATTTAAGGCTTACAAATACATAGAAGATATTCTTCTCAAGGTGGGAATTGAATATAGTGACATGCAGCTGATCGCAGAGGCTTATGATGTAAAAAATATTAAGAAAGCTTTCTTGATGTACAGATGGGCACAAGCATTGTACAGACGGGCACAAGCATATATAGAGACTGGAGACTATGTTTTGGCAGATGTAGACATCAAGAAAGCCCCTGAGGTGGACCCTCAAAACAGGGAGCGAAGAGATTGA 807 0.4089 MNLSKSIIPVLFEKPLSKISDTDEENRKDEEGGAWIRNVQQLFVIRDVQKPFDVMSEGASAFDGSPFAAEIRLIPVKEYMKLTYQPVVGNLKDIAQAYCDSFCPRDGDQDNEEKVPEWIIVPGSFVEMQKGDVLNLLVIILAHLKGMVDNLVVVAELDDLTVGASSLLFVYSLDYTRNGPSLMPGGSFKAYKYIEDILLKVGIEYSDMQLIAEAYDVKNIKKAFLMYRWAQALYRRAQAYIETGDYVLADVDIKKAPEVDPQNRERRD 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi232g00027 268 Gene3D Tetratricopeptide repeat domain 211 268 IPR011990 GO:0005515
Sebi232g00027 268 PANTHER 24-DEHYDROCHOLESTEROL REDUCTASE 67 119 IPR040165 -
Sebi232g00027 268 ProSiteProfiles TPR repeat profile. 230 263 IPR019734 GO:0005515
Sebi232g00027 268 SUPERFAMILY TPR-like 228 265 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi232g00027 Sebi-Chr232 661474 662691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi232g00027 228 265 Calmodulin-binding Proteins AT5G48570 60.526 7.18e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi232g00027 K09828 - gmx:100814521 98.2117