Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi232g00008 ATGGATAAGAAGGAGGATGGACCGGGGCCGAGGTGCGGCCACACGTTGACTGCGGTGGCAGCCGTCGGGGAGGAGGGGACGCCTGGGTACATTGGTCCGAGGCTGATTTTGTTCGGTGGTGCTACTGCACTTGAGGGCAATTCTGCGGCTGCAGGGACTCCTTCATCCGCTGGAAATGCTGGCATACGTTTAGCTGGTGCCACGGCTGATGTCCATTGTTATGATGTGTTAACTAATAAATGGTCTAGGCTAACTCCCTTTGGAGAACCCCCAACACCGAGGGCTGCACATGTGGCAACCGCTGTGGGAACCATGGTGGTTATTCAGGGTGGTATTGGTCCTGCTGGTTTGTCAGCAGAGGACCTTCATGTTCTTGATCTCACTCAGCAATGGCCTCGCTGGCATAGAGTGTCTGTTCAAGGCCCCGGACCAGGGCCACGGTATGGACATGTAATGGCTTTGGTTGGGCAGAGGTATCTTATGGCAATTGGAGGCAATGATGGAAAGAGGCCTTTGGCTGATGTATGGGCATTGGACACAGCTGCCAAACCTTATGAATGGCGTAAGTTAGAGCCAGAAGGAGAGGGCCCACCTCCATGCATGTATGCAACTGCAAGTGCACGCTCTGATGGGCTCCTTCTGCTTTGTGGAGGGAGGGATGCCAATAGTGTTCCATTGGCAAGTGCATATGGACTTGCTAAGCATAGAGATGGTCGCTGGGAATGGGCAATTGCCCCAGGGGTCTCACCATCTCCAAGATATCAGCATGCAGCGGTATTTGTTAATGCAAGGCTCCATGTGTCTGGCGGGGCTCTTGGTGGAGGACGGATGGTCGAAGACTCATCAAGTGTTGCGGTATTGGACACTGCTGCTGGAGTTTGGTGTGATACAAAATCTGTTGTTACCAGTCCAAGAACCGGAAGATACAGCGCTGATGCAGCTGGAGGAGATGCTGCAGTTGAGTTGACTCGGCGTTGTAGACATGCAGCTGCTGCTGTTGGCGACCTAATTTTTATTTATGGTGGTTTACGTGGGGGAGTCTTGCTAGATGACCTACTTGTTGCTGAAGATCTTGCTGCCGCTGAAACAACAACTGCTGCTTCACATGCGGCGGCGGCAGCGGCTGCATCTAATGTACAAGCAGGACACTTGCCTGGAAGATATGGATATGGTGATGATAGGACAAGGCAAACAATGGCTGAAGCGGCTGCTGATGGTTCTGTTGTATTGGGAAATCCAGTTGCACCCCCAATGAATGGTGACATTTATACTGATATCAGCACCGAAAATGCCTTGCTTCAGGGACCTCGGCGAACTGCCAAAGGAGTTGAGTATCTAGTTGAAGCATCTGCTGCAGAAGCCGAAGCTATCAGTGCCGCATTGGCTGCTGCCAAGGCACGACAAGAGAATGGAGAAGTTGAATCGCCTGACAGAGACCGCGGGGCTGAGGCTACCCCAAGTGGGAAACAAACATCTTCCTTGATTAAGCCTGATTCTGTAGGGACAAATAACATCACTCCTGGTGGAGTTCGGTTGCATCACAGAGCTGTAGTTGTTGCTGCTGAGACTGGTGGAGCATTAGGTGGCATGGTTAGACAGCTTTCGATTGATCAATTTGAAAATGAAGGCAGGCGGGTCAGTTACGGGACCCCAGAAAGTGCAACTGCTGCTAGAAAATTATTAGATCGGCAGATGTCTATCAATAGTGTGCCTAAAAAGGTCATAGCACACCTCTTAAAGCCTCGTGGATGGAAACCACCAGTACGCCGACAGTTTTTCTTAGACTGTAATGAAATTGCTGATCTTTGTGATAGTGCTGAGCGGATATTTTCCAGTGAACCAAGTGTCTTACAACTTAGTGCACCAATTAAAATATTTGGGGATTTACATGGGCAGTTTGGGGATCTCATGCGTCTTTTTGACGAGTATGGTGCACCATCAACTGCTGGTGACATTGCATATATCGATTATCTATTCCTAGGAGATTATGTTGATCGGGGGCAGCACAGCTTGGAAACTATAACCCTTCTTCTTGCTCTGAAGGTTGAGTATCCCAACAATGTACATTTAATACGTGGAAACCATGAAGCTGCAGATATTAATGCCCTCTTTGGTTTCCGAATTGAGTGCATTGAGAGGATGGGTGAGAGAGACGGAATTTGGACATGGCATCGGATAAACCGGCTGTTTAATTGGCTTCCTCTAGCAGCTTTAATTGAGAAAAAAATTATTTGCATGCATGGTGGTATTGGCCGTTCAATAAATCATGTGGAACAGATTGAGAATATTCAGCGTCCAATTCCAATGGAAGCAGGGTCAATTGTGCTTATGGATCTATTGTGGTCTGATCCTACAGAGAATGACAGTGTGGAAGGACTGAGGCCAAATGCTAGAGGTCCTGGATTAGTTACTTTTGGGCCTGATCGGGTAATGGAATTTTGCAACAACAATGATCTTCAGCTAATTGTTCGTGCACATGAATGTGTGATGGATGGGTTTGAGCGTTTTGCCCAGGGACATCTGATCACACTTTTCTCAGCTACAAATTATTGTGGTACTGCAAACAATGCTGGGGCAATATTAGTTTTGGGTAGAGACCTTGTTGTGGTTCCTAAATTGATTCATCCATTACCACCTGCAATTTCTTCACCAGAAACGTCACCAGAACGTCATATTGAAGATACATGGATGCAGGAGTTGAATGCTAACAGACCACCAACTCCAACAAGAGGCCGTCCCCAAGTGACAAATGACCGAGTTTTGGTTCTCACCCCTCAATCAGCAGGCCTTGATAAGAGACAAGTTCGACGTGCAAGGTTGGTAGCCACTACTAGGTTTACTTTGACAAAGGTAGAAGTTGCAGTTCGGGTTCACTGA 2877 0.4811 MDKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAAAGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRLTPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQWPRWHRVSVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQAGHLPGRYGYGDDRTRQTMAEAAADGSVVLGNPVAPPMNGDIYTDISTENALLQGPRRTAKGVEYLVEASAAEAEAISAALAAAKARQENGEVESPDRDRGAEATPSGKQTSSLIKPDSVGTNNITPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLSAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPIPMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQVTNDRVLVLTPQSAGLDKRQVRRARLVATTRFTLTKVEVAVRVH 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi232g00008 958 MobiDBLite consensus disorder prediction 468 507 - -
Sebi232g00008 958 Pfam Kelch motif 252 298 IPR011498 GO:0005515
Sebi232g00008 958 PIRSF STPPP_BSU1 1 924 IPR012391 GO:0004721|GO:0009742
Sebi232g00008 958 FunFam Serine/threonine-protein phosphatase 1 187 - -
Sebi232g00008 958 PRINTS Serine/threonine phosphatase family signature 818 838 IPR006186 GO:0016787
Sebi232g00008 958 PRINTS Serine/threonine phosphatase family signature 728 754 IPR006186 GO:0016787
Sebi232g00008 958 PRINTS Serine/threonine phosphatase family signature 657 684 IPR006186 GO:0016787
Sebi232g00008 958 PRINTS Serine/threonine phosphatase family signature 690 714 IPR006186 GO:0016787
Sebi232g00008 958 PRINTS Serine/threonine phosphatase family signature 622 649 IPR006186 GO:0016787
Sebi232g00008 958 PRINTS Serine/threonine phosphatase family signature 840 856 IPR006186 GO:0016787
Sebi232g00008 958 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 920 - -
Sebi232g00008 958 Gene3D - 558 902 IPR029052 -
Sebi232g00008 958 FunFam Serine/threonine-protein phosphatase 191 391 - -
Sebi232g00008 958 ProSitePatterns Serine/threonine specific protein phosphatases signature. 691 696 IPR006186 GO:0016787
Sebi232g00008 958 Pfam Galactose oxidase, central domain 146 199 - -
Sebi232g00008 958 FunFam Serine/threonine-protein phosphatase 558 898 - -
Sebi232g00008 958 SUPERFAMILY Metallo-dependent phosphatases 579 885 IPR029052 -
Sebi232g00008 958 SMART pp2a_7 594 878 IPR006186 GO:0016787
Sebi232g00008 958 Gene3D - 2 117 IPR015915 GO:0005515
Sebi232g00008 958 Gene3D - 118 378 IPR015915 GO:0005515
Sebi232g00008 958 Pfam Calcineurin-like phosphoesterase 622 829 IPR004843 GO:0016787
Sebi232g00008 958 CDD MPP_Bsu1_C 574 876 IPR041758 -
Sebi232g00008 958 MobiDBLite consensus disorder prediction 470 484 - -
Sebi232g00008 958 MobiDBLite consensus disorder prediction 485 506 - -
Sebi232g00008 958 SUPERFAMILY Kelch motif 66 355 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi232g00008 Sebi-Chr232 161128 173208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi232g00008 586 821 Calmodulin-binding Proteins AT5G63870 29.412 1.26e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi232g00008 - - gmx:100790406 1736.85