Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi231g00040 ATGTTGTCGATTTACAAAGGGAAGGCTGCGCTCACAGTGACTCCTAGACCACCGGCATTCACGCCACTGGAATCAGGGGCATTCAAGATATCTAGGGAAGGTTATGTGCTTCTTCAGTTTGCGCCAGCTGTTGGTTCACGTCAATATGATTGGAACAGAAAGCAGGTGTTCTCATTATCAGTGAATGAAATGGGAAGTGTGATGAGCCTTGGTGCAAGGGAGTCTTGTGAATTTTTTCATGATCCATTGAAGGGCAAAAGGTAG 264 0.4583 MLSIYKGKAALTVTPRPPAFTPLESGAFKISREGYVLLQFAPAVGSRQYDWNRKQVFSLSVNEMGSVMSLGARESCEFFHDPLKGKR 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi231g00040 87 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 3 86 IPR013742 GO:0003697|GO:0006355|GO:0006952
Sebi231g00040 87 Gene3D Transcriptional Coactivator Pc4; Chain A 2 87 IPR009044 GO:0003677|GO:0006355
Sebi231g00040 87 SUPERFAMILY ssDNA-binding transcriptional regulator domain 3 85 IPR009044 GO:0003677|GO:0006355
Sebi231g00040 87 Pfam Whirly transcription factor 4 86 IPR013742 GO:0003697|GO:0006355|GO:0006952
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi231g00040 3 86 Whirly Transcription Factor Family AT2G02740 75.000 1.36e-43 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Sebi231g00040 Whirly 6e-37 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi231g00040 K26559 - gmx:100804480 152.14