Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi231g00030 ATGGTCCCTCCGGGGCCACCCACTCCGATTGGTGGTGCCCAGTCTGTGTCGCCTTCCCTTTTGAGATCAAATTCAGGAATGTTGGGGGGTCAAGGTGGCCCTATGCCTTCACAGGCTTCCTTCCCTTCGCTGGTTTCACAGCGAACTCAGTATAACAACATGAACATGCTAGGCAGCATGTCCAATGTTACTTCCATACTAAACCAGTCTTTCCCAAATGGAATTCCGAATTCGGGGCTCTCTGGTCCTGGAAGTAGCCAGCGTGGTGGAGTTGATGCTGGGGCTGAACCGGATCCCATGTCTGGTGTTGGCAATGGAATGGGCTTTGGCAACCCTTCATCCTCTTTCGTGCAGTCGAATATGGTGAACCCTGGTTCATCTGGTCAAGGTCAGGGTCAGGGTCAGCAATTTTCAAATGCTTCTGGTAACCAGCTGTTGCCAGATCAACATCATTCTCAACAACTTGAAGTTCAAAATTTCCAACATAGTCAGCAGCAGTTTTCAGCTCCTTTGAACACTCAGCAGCAGCAGCATTTTCAATCAATTCGAGGAGGGATGGGTGGTGTTGGACCAGTGAAGTTGGAGCCCCAGGTAAGCAATGATCAGTTTGGGCAGCAGCCACAGCAACAGTTGCCATCATTGAGGAGTCTTACTCAGATGTCAAGGCAATCCTCCCAGGCTGCTGCTGCGCAGATGAATCTTTTGCATCATCAGAGACTTTTGCAATTCCAACAACATCAGCAACAACAGCTCTTAAAGGCAATTCCTCAACAACGGTCCCAGCTACCCCAGCAGTTTCAACAGCAGAATATGCCTATAAGGTCTCCTGTAAAACCAGCATATGAACCTGGGATGTGTGCTAGGCGGCTGACACATTACATGTATCAGCAACAACATAGACCGGAAGATAACAACATTGATTTCTGGAGGAAATTTGTTGCCGAGTATTTTGCCCCTAATGCCAAAAAGAAGTGGTGTGTTTCTATGTATGGAAGTGGCAGACAAACAACTGGAGTTTTCCCTCAGGATGTATGGCACTGTGAAATTTGTAATCGCAAACCTGGTCGTGGGTTTGAAGCAACTGCTGAGGTTCTTCCCAGGCTTTTCAAAATAAAGTATGAAAGTGGTACTTTAGAAGAGCTACTTTATGTTGACATGCCTCGCGAATATCATAATTCCTCTGGCCAGATTGTTCTAGATTATGCAAAAGCAATACAGGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGATATGTTCTTGGGAATTTTGTGCTCGGCGCCATGAAGAGCTCATCCCCAGAAGACTGTTAATACCTCAGATATCAGAAGTAGTAAATAGTATGAAAGACTTGATAGATTATAGCAGAGAAACAGGAACGGGACCTATGGACAGCTTAGCCAAATTCCCTCGGAGAACAAGTGGTTCATCTGGACTTCATGGTCAGGTACAACAGTCCCAAGATCAATTACCACAGCAGTCACAGTCACAGCAGCAACAACAACAGCATATGGTGGCCCATACCTCAAATGGTGATCAAAATTCCGTGCAAACTGCTGCCATGCAAATTGCTTCTAGCAATGGTGTGCCTAGTGTAAATAACACTGTCAATCCAGCATCTACATCAACTACCACAAGCACCATTGTTGGACTTCTCCACCAAAACTCTATGAATTCTAGACAACACTCAATGAACAATGCAAGCAGTCCATATGGAGGTAGTTCTGTTCAGCAGACATCCATTTCTGGTGAAGCTGACCCTAGCGATGCTCAGAGCTCAGTCCAGAAAATCATTCATGAGATGATGATGTCCTCCCAATTGAATGGCACAGGAGGAATGGTAGGTGCTGGTTCTATTGGAAATGACATGAAAAATGTAAATGGGATTCTACCAGTGAGTAACAATACAGGGCTCACAAGTGGCAATGGCCTGATGGGTAATGGGGCTGTGAACAGTAATTCTGGTGTTGGGGTTGGTGGTTATGGCACAATGGGTCTTGGTCCATCTGGCATGACCAATGGAATGAGACCTGCAATGGGAAATAATTCAATCATGAATGGAAGGGGAGGAATGGCATCTATTGCCCGGGAACAGGCCCCAGTAATGATGTTTGCTTTAGAGACAGCTAAAAAGGCTATGAAGGCATTGGAAACTCCCAAACCTGGTGTAATGGTGCTAAATTATTCTGGCGTGACAATATTTGGTCAGTCATAG 2253 0.4567 MVPPGPPTPIGGAQSVSPSLLRSNSGMLGGQGGPMPSQASFPSLVSQRTQYNNMNMLGSMSNVTSILNQSFPNGIPNSGLSGPGSSQRGGVDAGAEPDPMSGVGNGMGFGNPSSSFVQSNMVNPGSSGQGQGQGQQFSNASGNQLLPDQHHSQQLEVQNFQHSQQQFSAPLNTQQQQHFQSIRGGMGGVGPVKLEPQVSNDQFGQQPQQQLPSLRSLTQMSRQSSQAAAAQMNLLHHQRLLQFQQHQQQQLLKAIPQQRSQLPQQFQQQNMPIRSPVKPAYEPGMCARRLTHYMYQQQHRPEDNNIDFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQISEVVNSMKDLIDYSRETGTGPMDSLAKFPRRTSGSSGLHGQVQQSQDQLPQQSQSQQQQQQHMVAHTSNGDQNSVQTAAMQIASSNGVPSVNNTVNPASTSTTTSTIVGLLHQNSMNSRQHSMNNASSPYGGSSVQQTSISGEADPSDAQSSVQKIIHEMMMSSQLNGTGGMVGAGSIGNDMKNVNGILPVSNNTGLTSGNGLMGNGAVNSNSGVGVGGYGTMGLGPSGMTNGMRPAMGNNSIMNGRGGMASIAREQAPVMMFALETAKKAMKALETPKPGVMVLNYSGVTIFGQS 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi231g00030 750 Pfam LIM-domain binding protein 289 453 IPR029005 -
Sebi231g00030 750 PANTHER LIM DOMAIN-BINDING PROTEIN 453 706 IPR029005 -
Sebi231g00030 750 MobiDBLite consensus disorder prediction 74 146 - -
Sebi231g00030 750 MobiDBLite consensus disorder prediction 469 527 - -
Sebi231g00030 750 MobiDBLite consensus disorder prediction 483 527 - -
Sebi231g00030 750 MobiDBLite consensus disorder prediction 573 606 - -
Sebi231g00030 750 MobiDBLite consensus disorder prediction 198 229 - -
Sebi231g00030 750 MobiDBLite consensus disorder prediction 12 26 - -
Sebi231g00030 750 MobiDBLite consensus disorder prediction 107 146 - -
Sebi231g00030 750 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi231g00030 Sebi-Chr231 859062 868040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi231g00030 447 643 C2H2 Transcription Factor Family AT1G43850 44.485 6.34e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi231g00030 - - gmx:100787573 689.108