Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi230g00110 ATGGGAGTTGAAAAAGAAGGAACAAAAAGTGGAGGATATGTTGGTGGTTTTTTTCAGTTGTTTGATTGGACCTCAAAATCCCGTAAAAAATTATTTGCATCCAAGTCAGATATACCAGAGCCTTTGAAACAGGAAAGAAAAGTCGATTACAATGTGGCAATGACACGGCACTTTTTGGTGGATGAAGATGAAAATGGAGTTGGGGCAAGTGTTAGAGGAAGCTGTGATCATAGTTATGCTTCATCTGTTACAGATGATGAAGCATGTGGAACAAGAGCCCCTAGTGTAGTTGCCAGACTTATGGGATTAGATTCCTTGCCTCCTTCCAGTTTTTCTGATCCATATTCTACCCCATTTTTGGATACCCGATCCCTTCAAGATGCTCAGTTCTTCAGGAAAAACCCCAGTCATCAATATGACCATCAAACTCTATATTCTGGAAAGTTGGTTGAAAAGGTTGAAGGCTCTTCTAGGAACTTTATGGAGCCAAAGCCTCAAAAGACCATTACTAGGCCAATTGAAAAGTTCCAAACAGAAGTATTACCTCCAAAATCAGCTAAAACAATTCCTGTTACACACCATAAACTTTTATCCCCCATTAAGAGTCCTGGATTTATTCCAACCAACAATGCTGCTTATATAATGGAGGCTGCAGCAAGAATTATTGAACCTGGATCCCAAATTAGTACAAAGGCTAAAACACCTCTAGTAGGATCATCGACAGTATCATTGAGGGTCAAAGATCTTAAAGATAAGTTGGAGTCTTCGCAAAAAGGACCTCTGATTGCGTCATCTTCCATGGCTTCTCGAGCTCGAGAGCTTAAAGAAAGAAGAGAAATTCTCATAGAACCGCCAGGCTTTCAGAACCTTCTCAAAGAGGAAGATTCTTCATTGAAAAATAAGGGGAAGTCTGTTTCACTTGCAATCCAAGCAAAAGTGAATGTTCAGAAAAGGGAAGGTTTGAGTTTGACTGGTGGCAGAAGTTTGACAGGCCAAAAGGAGCATCTTGACATGAAATCCAACCAGCCCTCGAAGGCAAACCAACCATCAAAGGCAAATGTTCAGAACAATTTGCAAAAGAAATCTTCTGGTCAGAATTCTTCTGGTGTTCTCAGGCAGAATAATCTGAAACAGAATTATTCAATTGATAAAGACAAATTATCATCAAAGCCATTGGTTTCCAATTCACAAGGTAGGAAAGTTCTGACTGGGGATTCCTCTCATGGACGTCATAGAAGCTCTAGTAGTAAGTCCATTGCAAAATCTAAAGTTGGGTCCAGAAAGTCAGCCATTGAGGTGACAGATAGTGAAAAGGAAGTTTTATATACCAGCACAAACAATTTTCCTAGAAAGAAAAGGTCTACAGACAAGGATTGGAATGATAGGGTTGTGGATAATTTGTTCATTGATAAAACCCAGAAGCCTGTTAAGTCTAATCTAGTTAGTAATAAACAGTATGGTTGGGCTGAAGAAGTCAAAAAGAAAGACATGGATGTGGTTTCCTTCACATTTACCACACCATTAACTAGGAGCAATCCAGGTTTTGAGGAATCTGGACAGGCTGGCCAGAATAGTAATGGTCTTTCCTTGGATCAACGATTTAAAAGAGTGTTGCTTGACACAGACAATACAAGGTCTCCAATAGGATACAATGTGATTGGTGGTGATGCCTTAGGTATCCTTTTGGAACAGAAGTTGAGGGAATTAACACATGTAGTTGATACCTCTTGCAATGATGGTTCTAAAGTGAGGCAACCTTCCATTACTGCACCAATGTCAGAGGAACAAGTTGATGAGGTAGAACCACAGTTATTCAATTGCCGACATCCAAGTCCAATCTCTGTTCTTGAGCCTTCCTTTTCAATTGAAAGCTGTGAATCTTCAGCTAGTGCTGATTTTACTAGTACAGAAGGTCAGGAGGTTGTTCATGGCTTTAATTTTTCAAGGAAGTTCTGTCCTACTGAATCTGATATGGAGTTATCTGATTCAGCTTCTTCAAGTACATTGTCTGTCATGAAGTTTGGAAGATCAAGGACATGGGAGTTGGACTATGTGAAAGATATTTTGTGTAATGTTGAGTTGATGTATATGGACTTTTCTGTTGGTAGAGCACGTGAGATTGTAAACTCTCATCTATTCAACCAGTTGGAAAGCAGAAAGGGAGGGTTTAGGAGTGATGATGAATCTAGGATAAGAAGGAAAGTTATGTTTGATTGTGTGAGTGAATGTATGGACTTGAGATGCAAGCCTTATGTAGGGGGAGGATACAAAATGTGGACCAAAGGGGTTGCAATGGTGAAAAGAAAGGAATGGTTGGCAGAAGATGTGTACAAGGAGATTTCAAGTTGGACAGGGATGGGAGATTCAATGGTAGATGAGCTTGTGGACAAGGACATGAGCAGCCAATATGGAAGATGGCTAGATTTTGAGGTTGATGCTTTTGAACTGGGAGCAGAGGTGGTGGACCAAATATTCAATTCTTTAGTTGATGATGCTGTCACTGAATTCTTGCAATTGTAA 2520 0.3996 MGVEKEGTKSGGYVGGFFQLFDWTSKSRKKLFASKSDIPEPLKQERKVDYNVAMTRHFLVDEDENGVGASVRGSCDHSYASSVTDDEACGTRAPSVVARLMGLDSLPPSSFSDPYSTPFLDTRSLQDAQFFRKNPSHQYDHQTLYSGKLVEKVEGSSRNFMEPKPQKTITRPIEKFQTEVLPPKSAKTIPVTHHKLLSPIKSPGFIPTNNAAYIMEAAARIIEPGSQISTKAKTPLVGSSTVSLRVKDLKDKLESSQKGPLIASSSMASRARELKERREILIEPPGFQNLLKEEDSSLKNKGKSVSLAIQAKVNVQKREGLSLTGGRSLTGQKEHLDMKSNQPSKANQPSKANVQNNLQKKSSGQNSSGVLRQNNLKQNYSIDKDKLSSKPLVSNSQGRKVLTGDSSHGRHRSSSSKSIAKSKVGSRKSAIEVTDSEKEVLYTSTNNFPRKKRSTDKDWNDRVVDNLFIDKTQKPVKSNLVSNKQYGWAEEVKKKDMDVVSFTFTTPLTRSNPGFEESGQAGQNSNGLSLDQRFKRVLLDTDNTRSPIGYNVIGGDALGILLEQKLRELTHVVDTSCNDGSKVRQPSITAPMSEEQVDEVEPQLFNCRHPSPISVLEPSFSIESCESSASADFTSTEGQEVVHGFNFSRKFCPTESDMELSDSASSSTLSVMKFGRSRTWELDYVKDILCNVELMYMDFSVGRAREIVNSHLFNQLESRKGGFRSDDESRIRRKVMFDCVSECMDLRCKPYVGGGYKMWTKGVAMVKRKEWLAEDVYKEISSWTGMGDSMVDELVDKDMSSQYGRWLDFEVDAFELGAEVVDQIFNSLVDDAVTEFLQL 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi230g00110 839 MobiDBLite consensus disorder prediction 322 432 - -
Sebi230g00110 839 Pfam DUF761-associated sequence motif 81 112 IPR032795 -
Sebi230g00110 839 Pfam Domain of unknown function (DUF4378) 681 831 IPR025486 -
Sebi230g00110 839 MobiDBLite consensus disorder prediction 341 382 - -
Sebi230g00110 839 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 3 835 - -
Sebi230g00110 839 MobiDBLite consensus disorder prediction 388 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi230g00110 Sebi-Chr230 1196027 1200187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi230g00110 15 837 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 32.041 6.14e-97 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi230g00110 - - gmx:102669513 1204.89