Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi230g00107 ATGTCAGAAGGAACCAGTCTGGTGCTGGAATCATCTGAAAATGGCACAGATTTGTCTCAGGATGACATTGGCACTGTTGAGGAAACACCAGAGGACACAATTTTGTCAAGACAAACTTCTGTCAACCTTGTTCCTTTTATTGGTCAAAGGTTCATCTCTCAAGAAGCTGCTTATGAATTTTACTGCAGTTTTGCTAAACAATGTGGCTTTTCTATTAGACGACACCGCACTCGAGGGAAAGATGGGGTTGGCCGGGGAGTTACAAGGAGGGACTTTACTTGCCATCGTGGTGGATATCCCCAGACTAAACCTTCTGATGATGGGAAGATACAAAGGAACCGCAAATCGTCTCGCTGTGGTTGCCAAGCATACCTGCGCATTGTAAAAAGGGCAGATTTTGATGTCCCTGAATGGCGCGTTACTGGTTTTAGGAACATCCACAATCATGAGTTGTTAAAATCCAATGAGGTGCGTCTTCTTCCAGCATACTGCCCAATATCTCCTGATGACAAGAGTCGGATATGCATGTTTGCTAAAGCTGGAATGTCTGTAAGGCAAATGTTAAGATTGATGGAGCTAGAGAAAGGCATTAAACTTGGTTGTCTTCCTTTTACAGAGATAGATGTGAGAAATTTGTTGCAGTCTTTCAGAAATGTTGATAGAGATAATGATGCTATTGATCTGATCGCTATGTGCAAGAAATTAAAAGATGAAAATCACAACTTCAAGTATGAATTCAAGATAGACAATAATAACAGGCTTGAGCATATTGCATGGTCCTATGGCTCATCCATTCAAACATATGAGGCATTTGGAGATGCTGTTGTTTTGATACAACCTATCGAGTGGAGGCTTATGACATGCTGTTGGGAATTTGGCTTGGAATGGACAACAATGGAATGA 903 0.4153 MSEGTSLVLESSENGTDLSQDDIGTVEETPEDTILSRQTSVNLVPFIGQRFISQEAAYEFYCSFAKQCGFSIRRHRTRGKDGVGRGVTRRDFTCHRGGYPQTKPSDDGKIQRNRKSSRCGCQAYLRIVKRADFDVPEWRVTGFRNIHNHELLKSNEVRLLPAYCPISPDDKSRICMFAKAGMSVRQMLRLMELEKGIKLGCLPFTEIDVRNLLQSFRNVDRDNDAIDLIAMCKKLKDENHNFKYEFKIDNNNRLEHIAWSYGSSIQTYEAFGDAVVLIQPIEWRLMTCCWEFGLEWTTME 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi230g00107 300 MobiDBLite consensus disorder prediction 1 29 - -
Sebi230g00107 300 Pfam FAR1 DNA-binding domain 59 152 IPR004330 -
Sebi230g00107 300 MobiDBLite consensus disorder prediction 1 23 - -
Sebi230g00107 300 PANTHER OS01G0519700 PROTEIN 36 282 - -
Sebi230g00107 300 MobiDBLite consensus disorder prediction 94 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi230g00107 Sebi-Chr230 1141347 1142249 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi230g00107 FAR1 1e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi230g00107 - - gmx:100778434 547.74