Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi230g00083 ATGGGACAAGAATCAGATTCCAAAACCCAGTTGGTATTGAAGATTTGTTCCATTTCCACCCGTTCAGTTGTATGTATTCATAAACTTGTCTCAAACCCATCTAAGGCACCTTTCATTGATTGGTATTGCATTCTTGGAGTGGAAGAAAATGCAGGGGTAAATACCATTCGCAAGCAATACCATAAACTTGCCTTGCAACTTCATCCAGATAAGAATAAACACCCCAAGGCTGAAATTGCATTCAAACTTGTCTCTGAGGCATATACATGTTTATCTGATGCTGCAAAAAGAAAAGCTTTTGACTTGGAGAGATATAAGAGGTTCTGTGTTGAGTGCAATAGAATCCCTTATACATCAAGCATTGTCCCAAGCAATTCCAATGATTCAAGTTTCAAGGCATGGAATATTATCAGCAGGTCAATATCTAGTAAAGTTAGGAGAAATATTAGGGACATGAGAGAAAGATTGAAGGAGGAAGCTAAGGTGATAGAGAACTGTCTGCGGGCAAATTCAATGTCACAGAAAGAATCTTCCCTCTACAATCCAGCTGAGTATCTACATGGAAGCAGGTTCCAGCATAGAGTTGAGAAAGAAACCCCTGTTTTCAACCCATCAAACTACTCACATAAAGGATACCCTCATCCTAGAGACCATGTTTACAAGAATTCTGAGACATGTTGGTACTTGCAGGTAGAAAATATAGTCCATAATGACAAGAGAGAAGCTAAGTATGCCTCTCCAGTTTTGAGGTCAAATCACAAAGGAGTATGCACACAAGCAAATTTGCTTATGTCTCATCACAATGTTGATTAA 813 0.3887 MGQESDSKTQLVLKICSISTRSVVCIHKLVSNPSKAPFIDWYCILGVEENAGVNTIRKQYHKLALQLHPDKNKHPKAEIAFKLVSEAYTCLSDAAKRKAFDLERYKRFCVECNRIPYTSSIVPSNSNDSSFKAWNIISRSISSKVRRNIRDMRERLKEEAKVIENCLRANSMSQKESSLYNPAEYLHGSRFQHRVEKETPVFNPSNYSHKGYPHPRDHVYKNSETCWYLQVENIVHNDKREAKYASPVLRSNHKGVCTQANLLMSHHNVD 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi230g00083 270 PRINTS DnaJ domain signature 42 60 IPR001623 -
Sebi230g00083 270 PRINTS DnaJ domain signature 76 96 IPR001623 -
Sebi230g00083 270 PRINTS DnaJ domain signature 60 75 IPR001623 -
Sebi230g00083 270 PANTHER BNAC03G44070D PROTEIN 21 232 - -
Sebi230g00083 270 Gene3D DnaJ domain 39 165 IPR036869 -
Sebi230g00083 270 SMART dnaj_3 39 96 IPR001623 -
Sebi230g00083 270 CDD DnaJ 40 93 IPR001623 -
Sebi230g00083 270 ProSiteProfiles dnaJ domain profile. 40 104 IPR001623 -
Sebi230g00083 270 SUPERFAMILY Chaperone J-domain 31 104 IPR036869 -
Sebi230g00083 270 Pfam DnaJ domain 40 101 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi230g00083 Sebi-Chr230 937367 938495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi230g00083 40 101 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 45.455 9.69e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi230g00083 - - gmx:100778573 389.423