Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi230g00080 ATGGTTCTTTTTCCATCTTTTGTCAATGGATTGGCAAGAACTGTGTCGTTGAAGAAAGAGAAGAGCTGTGGAAAGGATGATGGAAGAAAAACTGTGGAAGCATTGGCAAAGGAAGCAAGGAAGAATGAATTGTTATTGAGTTCATCTGGAATTGTTAAGTCTTCCAAGGCCAACAACTTTGCCTGTTTGTTCACTAAACAGGGCCAGAAAGGAGTCAATCAGGACTGCCTTATTGTTTGGGAGGAATTTGGTTGCCAAGAAGACATAATCTTCTGTGGAGTTTTTGATGGACATGGCCCTTGGGGACACTTTGTAGCCAAAAGGGTCAGGAAACTACTACCTGCTTCTTTGCTATGCAATTGGCAGAAAAATCTGGCTGCAACATCACTTGAGCTTGATTTTAAGATGGAAGCAGATAGGAACCTCCATAGATTTGAAATATGGAAGCAGTCCTACATGAAGACATGTGCTGCAGTTGATCAGGATCTCAAACAACATACTAGGATTGATTCCTTTCAAAGCGGTACTACAGCTTTGACAATTATCAAACAGGGTGAACATCTCATTATAGCAAACGTTGGTGATTCTAGGGCTGTCTTGGCAACCACCTCAGAGGATGGCACATTGACTCCTCTTCAGCTTACCACTGACTTTAAGCCAAATTTACCAAAGGAGGCAGAGCGTATAATTCAATCCAGAGGGAGGGTATTCTGTTTGGAAGATGAACCAGGAGTGTGCAGGGTCTGGATGCCAAATGGTAAGACCCCGGGACTAGCAATATCTAGAGCATTTGGTGATTACTGTGTCAAAGATTTTGGACTAATCTCTGTGCCAGACGTGACACAAAGAAAACTTACCACCAAGGATCAATTTGTCATCTTGGCAACAGATGGGGTATGGGATGTTATTTCTAACCAAGAAGCAGTCAAAATTGTTGCTTCAACGCCTCATAAAGAAAAAGCAGCTCAAAGACTCGTGAAATATGCTATACATGAATGGAAATGTAAGAGAAGGGGCATTGCTATTGATGATGTATCAGCTGTTTGCCTCTTCTTTCACTCTCCCCCCTCTCACCAATTCCCTACCACTAAAGTTGTTGAATAA 1104 0.4212 MVLFPSFVNGLARTVSLKKEKSCGKDDGRKTVEALAKEARKNELLLSSSGIVKSSKANNFACLFTKQGQKGVNQDCLIVWEEFGCQEDIIFCGVFDGHGPWGHFVAKRVRKLLPASLLCNWQKNLAATSLELDFKMEADRNLHRFEIWKQSYMKTCAAVDQDLKQHTRIDSFQSGTTALTIIKQGEHLIIANVGDSRAVLATTSEDGTLTPLQLTTDFKPNLPKEAERIIQSRGRVFCLEDEPGVCRVWMPNGKTPGLAISRAFGDYCVKDFGLISVPDVTQRKLTTKDQFVILATDGVWDVISNQEAVKIVASTPHKEKAAQRLVKYAIHEWKCKRRGIAIDDVSAVCLFFHSPPSHQFPTTKVVE 367
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sebi230g00080 367 SMART PP2C_4 51 350 IPR001932 -
Sebi230g00080 367 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Sebi230g00080 367 SUPERFAMILY PP2C-like 55 355 IPR036457 -
Sebi230g00080 367 PANTHER PROTEIN PHOSPHATASE 53 350 IPR015655 GO:0004722|GO:0006470
Sebi230g00080 367 Pfam Protein phosphatase 2C 78 331 IPR001932 -
Sebi230g00080 367 CDD PP2Cc 59 352 IPR001932 -
Sebi230g00080 367 Gene3D - 47 354 IPR036457 -
Sebi230g00080 367 FunFam Probable protein phosphatase 2C 34 51 354 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sebi230g00080 Sebi-Chr230 903113 905619 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi230g00080 1 353 PP2C-type Phosphatase Gene Family AT3G05640 61.127 1.55e-169 475
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi230g00080 - - gmx:100817397 630.943