Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi230g00050 ATGGGAGTCAAAATATTGCTTCCTTGCTACCTCCCTCTAGACCACTGGAGTGTGAATGTGAAGCAGTGTGTGAATGGCTGCTTCAAGGAACCTGAAATTTTGGATTGTGTGAAGTGTGTGAACAAGATTGCTGAAGACAATTGGAAGAAGTACACAGCTGGAGATTTTAGCTCATTGCAAAGGCACCTTATGAAATATCCTATCAACGTCCTCAATGCCTCCCCTGCCGCCAGGAAGGAGATGGACCCGGTGTTGTTTTTCACCGGAGAAGAAGGTTCTGGCTCCTCGGAGTTGGTTTGCAAGACGCTGTACGCGTGGGAGGAGGCTGTGTCGCCGCATTTGGCCGCTGAGAGGGAAGGTTTCGTCGTGAAGGACTCGTTGGTGCTGGAAACATTGCAGCGGTGTTTTCGGGATGGGTTCGAAACATTGCAACGGCAGAACAAAGCGGATATGGAATGTGTGGTTCAAGGAATTATAGAGACACAGCATGTTGAGGCCCTTGAGATTCTTCTTCAAGGTCTATGTGGTGTTCAGAGAGAACGGTTGAGGATACATGAAATATGCCTCAAGAATGGTCCAAATTTGGGCACTGTAGCCTCAGAGGTTCGGCTCTTGTGTGATCTAGAGCAAGCTGAACCCTCATGGACTGTTAGACATATTGGTGGTGCAATGAGGGGTGCTGGCGCTGAGCAAATTTCAGTTCTGGTTAGGACAATGGTGGAAAGCAAAGCAAGTAAGAATGTGCTTCGTATGTTTTATACACTGGGGTACAAGTTAGACCATGAGCTGCTGAGGGTGGGGTTTTCCTTCCAGTTCTATAGGGGAGCACAAATCACTGTAACGGTATCATCAATCAATAAAATGCTGAAGCTGCATGCAACTGATGAGGCTGTGCCAGTAACACCTGGTATACAAATGGTTGAAGTAACAGCGCCTGCTACTGCTGAAACCTATACTGAAGTTGCTTCTGCTGTGTCATCCTTTTGTGAATACCTTGCACCGCTTCTCCATCTGTCCAAACCAGGCATTTCAACCGGTGTTGTTCCTACTGCCGCTGCTGCAGCTGCGTCTCTCATGTCTGATGGTGGCGGTACCACATTGTAG 1104 0.4801 MGVKILLPCYLPLDHWSVNVKQCVNGCFKEPEILDCVKCVNKIAEDNWKKYTAGDFSSLQRHLMKYPINVLNASPAARKEMDPVLFFTGEEGSGSSELVCKTLYAWEEAVSPHLAAEREGFVVKDSLVLETLQRCFRDGFETLQRQNKADMECVVQGIIETQHVEALEILLQGLCGVQRERLRIHEICLKNGPNLGTVASEVRLLCDLEQAEPSWTVRHIGGAMRGAGAEQISVLVRTMVESKASKNVLRMFYTLGYKLDHELLRVGFSFQFYRGAQITVTVSSINKMLKLHATDEAVPVTPGIQMVEVTAPATAETYTEVASAVSSFCEYLAPLLHLSKPGISTGVVPTAAAAAASLMSDGGGTTL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi230g00050 367 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION, SUBUNIT 18 151 351 IPR019095 GO:0003712|GO:0006357|GO:0016592
Sebi230g00050 367 Gene3D - 155 340 - -
Sebi230g00050 367 Pfam Phospholipase D C terminal 27 71 IPR024632 -
Sebi230g00050 367 Gene3D - 42 154 IPR027417 -
Sebi230g00050 367 FunFam Mediator of RNA polymerase II transcription subunit 18 151 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi230g00050 Sebi-Chr230 543491 556961 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi230g00050 24 70 Phospholipase D Gene Family (Wang group) AT4G00240 44.681 1.93e-08 54.3