Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi230g00048 ATGCCACAGGGCAATGCCGCCGCTGCTCTATACGACCACAGTGCCGCCCTGCACAACGATGCCGGCGACGCCGTCATGGCGCGGTGGCTTCAGTCCGCCGGCTTGCAGCATCTGGCCTCTCCCGTCGCTTCATCTGGCATCGATCATCGCCTCCTCCCCAACCTTCTCATGCAGGGTTATGGAGCACAGTCTGCTGAAGAGAAGCAAAGGCTTGTAAAGTTAATGAGAAACCTCAATTTTAATGGGGAGTCTGGTTCAGAGCCATATACGCCCACCACCCAAACTTTAGGTGGTGGAGTGGCTGCATCGGATGGGTTTTATTCTCCTGAGTTCAGGGGGGATTTTGGAGCTGGGCTTTTGGATCTTCATGCTATGGATGATACAGAGCTTTTGTCTGAGCATGTTATTTCAGAACCTTTTGAACCATCACCCTTCATGGCCGGAGATACTAGGGCATTTGAAGATGATTTCAATCCAATTAACAGCAAGCTGGAAAGAGAAGTAGATGCTGATGCATCAATTTCTTTACCTATGAATGAGAAAGAGAATAGTACAAGGGAAAATAATGTTGCTAAGATTAAAGTTGTGGTACGCAAAAGACCTTTAAACAAGAAGGAGCTTGCTAAGAAGGAGGATGATATTGTAACTGTATCTGACAATGCATATTTGACAGTCCATGAACCCAAACTAAAGGTTGATTTGACAGCTTATGTGGAGAAGCATGAGTTTTGTTTTGATGCTGTTTTTGATGAGCGTGTTACCAATGATGAAGTATACCAAGGTACAGTTGAACCAATTATTCCTACAATTTTTGAACGAACCAAAGCTACCTGTTTTGCTTATGGTCAGACAGCGTTGTTCCTGGCTCCCATGAAACTTTGCATGAGGGAAGATGGACGGCAGCAAGTTTGCATTGTAGGACTGCAAGAATTTGAAGTTTCTGACGTACAAATTGTCAAAGAATTCATTGAAAAGGGAAATGCTGCAAGAAGTACAGGATCCACTGGTGCTAACGAGGAGTCCTCCAGGTCACATGCTATTTTACAACTGGCTGTAAAGAAACACAGTGAGGTGAAAGAGAGCAAGCGGAATAATGATGGGAATGAGGCAAGAAGTGGGAAGGTTGTGGGAAAGATTTCTTTTATTGATCTTGCTGGAAGTGAAAGAGGTGCTGATACTACTGATAATGATCGTCAGACACGGATTGAAGGAGCAGAAATCAATAAGAGCCTTTTGGCTTTGAAGGAATGCATTCGTGCTTTAGACAATGACCAGATTCATATTCCATTTCGGGGAAGCAAACTTACAGAAGTGCTTCGTGACTCCTTTGTAGGCAATTCAAAGACTGTTATGATCTCTTGTATATCTCCAGGTGCCGGGTCTTGTGAACACACACTTAACACCTTAAGATATGCTGATCGGGTTAAAAGTCTATCCAAAAGTGGAAATCCTAGAAAAGACCAGGTCCCAAATTCTGTACCACAAACTAGCAAGGAAGTTTCATCCATATCATCCCTTCCAGCTAGTGCTGGTTTAGAAGATTTTAATGATCAACGTCAAGAGAAAACAATGGATATGGGCAGGAAACTTGTTGAAAAGGAAAGTTCCTTGTACAGCTCTGCTGCTGATGTTGACAAACAGTCATCAAGTGTCTCTTCAAGTTACCTATTAAATGGCCGAGAGGAAAAAAACCAAGGTTTGGCTTCTGCTTCAGTTGACAGGGAGAAGGTTGAAGTGAAGAACTCATACAGTGGTTCTAACAGTCAAAAGATGAACTCTTATTCACAAAATGATACGGTTGAGAAATTGCAAAAGGTGTCTCCCCCACGCAGAAAAGGTTCTAAGGATGTTGACAAACAGTCATCAAGTGTTTCTTCAAGTTACCTATTAAATGGCCGAGAGGAAAAAAACCAAGGTTTGGCTTCTGCTTCAATTGACAGGGAGAAGGTTGAAGTGAAGAACTCATACAATGATTCTAACAGTCAAAAGATGAACTCTTCACAAAATGATGCGGTTGAGAAATTGCAAAAGGTGTCTCCCCCACGCAGAAAAGGTTCTAAGGATGAAAAGTCTGAAAGGCCTGCAAACTGGATGAAAAGGGATGCCAATGGTTCTGATCTCTTCACGGCTAGCTCCAAGCAGCAGACAATGGGGAATTATAACACTGTTACAGCTGGGTCCAGGCTTTATGAAGCAGAATCCTCTCCTGACGGGAATATCAGTGCAGTACTCGAGGAAGAAGAAGCCTTAATTGCTGCTCATAGGAAAGAAATTGAGGACACAATGGAGATTGTTCGTGAAGAAATGAAACTCTTGGCCGAAGTGGACCAACCAGGAAGCCTTATTGACAACTATGTAACCCAATTGAGCTTTGTGCTTTCTCGCAAAGCAGCTAGTCTCGTGGGTCTGCAAGCTCGCCTTGCAAGATTCCAACATCGACTAAAAGAACAGGAGATTTTAAGTAGAAAAAGAGTTCCCCGTTAA 2484 0.4332 MPQGNAAAALYDHSAALHNDAGDAVMARWLQSAGLQHLASPVASSGIDHRLLPNLLMQGYGAQSAEEKQRLVKLMRNLNFNGESGSEPYTPTTQTLGGGVAASDGFYSPEFRGDFGAGLLDLHAMDDTELLSEHVISEPFEPSPFMAGDTRAFEDDFNPINSKLEREVDADASISLPMNEKENSTRENNVAKIKVVVRKRPLNKKELAKKEDDIVTVSDNAYLTVHEPKLKVDLTAYVEKHEFCFDAVFDERVTNDEVYQGTVEPIIPTIFERTKATCFAYGQTALFLAPMKLCMREDGRQQVCIVGLQEFEVSDVQIVKEFIEKGNAARSTGSTGANEESSRSHAILQLAVKKHSEVKESKRNNDGNEARSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPGAGSCEHTLNTLRYADRVKSLSKSGNPRKDQVPNSVPQTSKEVSSISSLPASAGLEDFNDQRQEKTMDMGRKLVEKESSLYSSAADVDKQSSSVSSSYLLNGREEKNQGLASASVDREKVEVKNSYSGSNSQKMNSYSQNDTVEKLQKVSPPRRKGSKDVDKQSSSVSSSYLLNGREEKNQGLASASIDREKVEVKNSYNDSNSQKMNSSQNDAVEKLQKVSPPRRKGSKDEKSERPANWMKRDANGSDLFTASSKQQTMGNYNTVTAGSRLYEAESSPDGNISAVLEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSFVLSRKAASLVGLQARLARFQHRLKEQEILSRKRVPR 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi230g00048 827 ProSiteProfiles Kinesin motor domain profile. 288 478 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi230g00048 827 Pfam Kinesin motor domain 292 477 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi230g00048 827 Pfam Kinesin motor domain 198 285 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi230g00048 827 CDD KISc_KIF2_like 192 476 - -
Sebi230g00048 827 Gene3D Kinesin motor domain 169 286 IPR036961 -
Sebi230g00048 827 MobiDBLite consensus disorder prediction 538 703 - -
Sebi230g00048 827 MobiDBLite consensus disorder prediction 604 618 - -
Sebi230g00048 827 MobiDBLite consensus disorder prediction 676 699 - -
Sebi230g00048 827 Gene3D Kinesin motor domain 287 477 IPR036961 -
Sebi230g00048 827 MobiDBLite consensus disorder prediction 581 603 - -
Sebi230g00048 827 MobiDBLite consensus disorder prediction 640 654 - -
Sebi230g00048 827 Coils Coil 800 820 - -
Sebi230g00048 827 SMART kinesin_4 190 484 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi230g00048 827 PRINTS Kinesin heavy chain signature 428 449 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi230g00048 827 PRINTS Kinesin heavy chain signature 378 396 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi230g00048 827 PRINTS Kinesin heavy chain signature 335 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi230g00048 827 MobiDBLite consensus disorder prediction 655 674 - -
Sebi230g00048 827 MobiDBLite consensus disorder prediction 619 633 - -
Sebi230g00048 827 MobiDBLite consensus disorder prediction 540 560 - -
Sebi230g00048 827 FunFam Kinesin-like protein 378 437 - -
Sebi230g00048 827 MobiDBLite consensus disorder prediction 478 517 - -
Sebi230g00048 827 ProSitePatterns Kinesin motor domain signature. 377 388 IPR019821 GO:0003777|GO:0005524|GO:0007018
Sebi230g00048 827 PANTHER KINESIN-RELATED PROTEIN 6 292 620 IPR027640 GO:0003777|GO:0007018
Sebi230g00048 827 ProSiteProfiles Kinesin motor domain profile. 192 285 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi230g00048 827 Coils Coil 744 775 - -
Sebi230g00048 827 MobiDBLite consensus disorder prediction 482 511 - -
Sebi230g00048 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 478 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi230g00048 Sebi-Chr230 520533 527075 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi230g00048 178 478 Calmodulin-binding Proteins AT5G65930 29.692 5.18e-29 123