Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi230g00037 ATGCAGAACGAGGAAGGACAGATCACCGAGCTTTACATTCCTAGGAAGTGCTCTGCTACAAACAGATTGATCACTGCCAAGGACCATGCCTCGGTTCAGATCAACATTGGCCATTTGGATGAGAACGGTATCTACAATGGCCACTTCTCCACCTACGCCCTCTGTGGCTTCGTTCGTGCTCAGGGCGATGCTGACAGTGCACTAGATCGCCTGTGGCAGAAGAAGAAAGCTGAGATTAAGCAACAGTAG 249 0.502 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDENGIYNGHFSTYALCGFVRAQGDADSALDRLWQKKKAEIKQQ 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi230g00037 82 PANTHER 40S RIBOSOMAL PROTEIN S21 1 81 IPR001931 GO:0003735|GO:0005840|GO:0006412
Sebi230g00037 82 PIRSF RPS21e 1 82 IPR001931 GO:0003735|GO:0005840|GO:0006412
Sebi230g00037 82 Pfam Ribosomal protein S21e 1 76 IPR001931 GO:0003735|GO:0005840|GO:0006412
Sebi230g00037 82 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Sebi230g00037 82 Gene3D - 1 81 IPR038579 -
Sebi230g00037 82 FunFam 40S ribosomal protein S21 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi230g00037 Sebi-Chr230 399466 400534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi230g00037 1 81 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 83.951 2.88e-51 153