Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi230g00036 ATGGTTTTCTTAAATCAGGAGACAAGAATGCTTAGTCCTGAAGGTGAACTTGAAATAAGTTTTGGCTATCAATGCAATAGGGGTAAAGATATCCCTTTCAAGATTGCCAATGGCTTTGAAATCTTTCCTGAAATGCGCAGAACAAGCAGTTTCTCTTGCTTGTCTGGTGCTGCCTTAAGTGCAAATGCTACACTAGCCAACACAAACATCTGCAATGGTGTGATAGGAGAAGAAATCCTTCCAAGTTTGGACTCTCCTAATTCATTTCGTAGGGTACCCTCTTCACCAAGTCTTCCAAAGTTGGACATACCTTCTCTCCATAGTAGTTTGTCAAACCTAAGTTGCAGCCCATCCACTCCAAGTACTATGCTTGAATATGACCCTTGTTCATTAACATCCATGAGTACTCCTTCCAGAAATGAAGGTTTTCTTAATGCTATGGAAGTACAAGTAGCAGGAGGTGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGATGGCTCTTCTGTGCAATTTATGATGGCTTTAATGGGAGAGATGCTGCTGATTTTCTGGCTGGTACCCTTTATGACACTTTAGTATCCTATTTTAACATGTTATATTGGGATTTGGAACCAGATTCCATCAAAGCTTCTAACAACATGAGTTTGAGTGGATCCTTTGAACATAAATTGGATGATAATCTTATTCTTCCTAAGCATCAATCTCCATCATCAATATTTAAGGGAAACAACAATTCTAGTCTTGGCTGTTTTGCAAACAATAGTCCACCTGCCAAATCAGATGCATCTCATGAATCATTTTCACATGTGGTACTTGATAGCCTCCAACAAGTTCTTAATCAGGTTGAGAATGATTTCTTGTGCATGGTTGAGCAGGAAATGGAGGAACGTCCAGATTTAGTTTGTGTTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGGAATGATTTGTATACACTTAATCTAGGAGACAGCAGAGCAGTCTTGGCAACACACAGTACTGATGACATAATGAATGAGAATGAGAGATTGAAAGCTATCCAACTTACAGATAGTCATACTGTTGACAATGAAACTGAAAAAGCTAAACTTCTTGCTAGTCATCCTAATGATCCAAAGACCATTGTAGCAGGGAAAGTGAAAGGAAAATTGAAGGTTACACGTGCTATTGGAGTTGGCTACTTGAAAAAGAAAATTCTGAATGATGCATTGATGGGAATCCTTCGAGTTAGTAATCTTATAAGCCCGCCATATATCTCAACTGATCCATCACTGAATGTGCATAAAATCTCAAATTGTGATCAATTTGTTATAGTTGGAAGTGATGGTTTATTTGACTTCTTCAGCAATGATGAAGCAGTACAACTTGTGGAGTCTTATATATTGAGCAATCCTTTTGGTGATCCTGCAAAATTTCTTATTGAGCAACTAGTAGCAAGAGCAGCTGATTCTGCAGGTTTCAGCATGGAAGAGTTGATGAATATTCCAGCTGGGAGGAGAAGGAAGTACCATGATGATGTGACTGTAATTGTGATCATCCTTGGGATGAATCAACGGACTTCAAAGGCATCAACTTGCATCTAA 1599 0.3884 MVFLNQETRMLSPEGELEISFGYQCNRGKDIPFKIANGFEIFPEMRRTSSFSCLSGAALSANATLANTNICNGVIGEEILPSLDSPNSFRRVPSSPSLPKLDIPSLHSSLSNLSCSPSTPSTMLEYDPCSLTSMSTPSRNEGFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTLVSYFNMLYWDLEPDSIKASNNMSLSGSFEHKLDDNLILPKHQSPSSIFKGNNNSSLGCFANNSPPAKSDASHESFSHVVLDSLQQVLNQVENDFLCMVEQEMEERPDLVCVGSCVLLVLLHGNDLYTLNLGDSRAVLATHSTDDIMNENERLKAIQLTDSHTVDNETEKAKLLASHPNDPKTIVAGKVKGKLKVTRAIGVGYLKKKILNDALMGILRVSNLISPPYISTDPSLNVHKISNCDQFVIVGSDGLFDFFSNDEAVQLVESYILSNPFGDPAKFLIEQLVARAADSAGFSMEELMNIPAGRRRKYHDDVTVIVIILGMNQRTSKASTCI 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi230g00036 532 FunFam Probable protein phosphatase 2C 40 124 528 - -
Sebi230g00036 532 SMART PP2C_4 134 517 IPR001932 -
Sebi230g00036 532 Pfam Protein phosphatase 2C 239 483 IPR001932 -
Sebi230g00036 532 Gene3D - 116 528 IPR036457 -
Sebi230g00036 532 SUPERFAMILY PP2C-like 156 520 IPR036457 -
Sebi230g00036 532 ProSiteProfiles PPM-type phosphatase domain profile. 143 519 IPR001932 -
Sebi230g00036 532 PANTHER PROTEIN PHOSPHATASE 2C 151 517 IPR015655 GO:0004722|GO:0006470
Sebi230g00036 532 CDD PP2Cc 156 519 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi230g00036 Sebi-Chr230 385286 387294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi230g00036 13 532 PP2C-type Phosphatase Gene Family AT3G16560 62.689 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi230g00036 - - gmx:100791404 803.897