Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi230g00025 ATGATGTTTAAAGCATTTCTCTGCCATAACGGTTTGGGTATCACAAGAAAATCAACACTTTTGCCGTTTCCATTTTCCCTCACATTCTGCAGCACCAGCACTTCAGATCCTCACTCATTCGCTGTGTCCTACCTCATCAACAATTTTGGCTTCTCACCGGAATCCGCTCTCAAAGCTTCCAAGATTCTTCGTTTCAAGACCTCGGAAAAGCCCGATTCAGTTGTCTCCTTCCTCAGAAACCACGGTTTCCCAGACTCAGATATACGCACCATCATCAGAAGGGAACCGTGGCTCCTCTCTTGCGATGCCAACAAAAGGGTTTTGCCAAAGTTTCAATTTTTTCTCTCCAAAGGCGCTTCTACCTCTGACATTGTTCGCATCGTCACAGGGAACCCCAGATTTGTGAAACTAAGCTTGGAAAATCGTGTACTCCCAGCTTATAATTTGGTAAATAAATTCCTCCAATCTGAGGATAAGGCTCTTAATTCTATAATTTACTGTCCATCTTTGCTTGCTAGTGATGTTTTCACACTTAATGTCAAAAAGTTGGTTGATAATGGTGTGGCCAGTTCCAACATTTCCAGGATCCTTCGTTTGACGCCTTATATTCTATGCTCTGCTACCTTGGGGAAGACGGTGCAGGAATTGAAAGACCTGGGATTTGATCCTTCCAAATCATACTTTGGTGTTGCATTGCTTGCTAAAAGAGCTACAAGCAAATCCAAGTGGGATGAGAAAATTGACACCTATAAGAGGTGGGGTTGGTCTGAAAAAACAATTTTGGAAGCATTTAAGAGGCAGCCAAACTGTATGACAATATCCATTGATAAAATCAATAGGGTGATGCAATTTTGGATTAATGAGTTAGGTTGGGATTCTTCTTACCTTGTCAAGGGACCAGGGATCATTTCATATAGTTTGGAGAAAAGGGTCATTCCAAGGGCCTTGGTTCTCCACTATCTTCTATCCAAAGGTTTGAGAAGCAAGAGTACCAACTTGCTTACACCATTTATGATTTCTGAGAAGCAGTTCTTACATAGGTTTGTGAAATGCTTTGATGAGGAGGAAACTTCTCAGATATTGAAGTTATATTGGGGGAAAATGAATGTGGAAAATAAAAGGGCACAGGGGAGGGGAGAATCTCACTTCCATAATATTTGA 1161 0.4143 MMFKAFLCHNGLGITRKSTLLPFPFSLTFCSTSTSDPHSFAVSYLINNFGFSPESALKASKILRFKTSEKPDSVVSFLRNHGFPDSDIRTIIRREPWLLSCDANKRVLPKFQFFLSKGASTSDIVRIVTGNPRFVKLSLENRVLPAYNLVNKFLQSEDKALNSIIYCPSLLASDVFTLNVKKLVDNGVASSNISRILRLTPYILCSATLGKTVQELKDLGFDPSKSYFGVALLAKRATSKSKWDEKIDTYKRWGWSEKTILEAFKRQPNCMTISIDKINRVMQFWINELGWDSSYLVKGPGIISYSLEKRVIPRALVLHYLLSKGLRSKSTNLLTPFMISEKQFLHRFVKCFDEEETSQILKLYWGKMNVENKRAQGRGESHFHNI 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi230g00025 386 Gene3D Transcription termination factor 3, mitochondrial 166 357 IPR038538 -
Sebi230g00025 386 PANTHER CGI-12 PROTEIN-RELATED 37 353 IPR003690 GO:0003690|GO:0006355
Sebi230g00025 386 FunFam Mitochondrial transcription termination factor-like 139 356 - -
Sebi230g00025 386 Pfam mTERF 75 222 IPR003690 GO:0003690|GO:0006355
Sebi230g00025 386 Pfam mTERF 176 344 IPR003690 GO:0003690|GO:0006355
Sebi230g00025 386 SMART mt_12 194 222 IPR003690 GO:0003690|GO:0006355
Sebi230g00025 386 SMART mt_12 261 292 IPR003690 GO:0003690|GO:0006355
Sebi230g00025 386 SMART mt_12 89 120 IPR003690 GO:0003690|GO:0006355
Sebi230g00025 386 SMART mt_12 125 156 IPR003690 GO:0003690|GO:0006355
Sebi230g00025 386 SMART mt_12 293 327 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi230g00025 Sebi-Chr230 300600 301760 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sebi230g00025 mTERF 2.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi230g00025 K15031 - gmx:102663414 365.925