Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi230g00024 ATGTTCAAAGCGTTTCTGTGCCATAATGTTCTTGGTGTCACAAGTAGATCAACAGCTCCAAGACTTGACCCTCTTCTGCGGCACTTGCCCTTATCATTTTCTCTCACATTCTGCACCACGACCACTTCAGACCCTCACTTGTTCGCTGTGTCCTACATCATCAACAATTTTGGGTTCTCACTAGAATCCGCTCTCAAAGCTTCTAAGGGGCTTCGTTTCAAGACCTCAGAAAAGCCCGATTCAGTTGTCACCTTCCTCAGAAACCACGGTTTCCCAGACTCAGATATACGCACCATCATCAGAAGGGAACCGTGGCTCCTCTCATGCGATACCAACAAAAGGGTTTTGCCAAAGTTTCAATTTTTACTCTCCAAAGGTGCTTCCACCTCTGACATTGTTCGCATGGTGGCAACGAACCCCAGATTGCTGAAATTAAGCTTTGAGAATCGTATGATCCCAGCATATAAATTGGTAAATAAATTTTTCCATTCTGAGGATAAGGCCCTTGCTTGTATAATTTATTGTCCGTCTTTGCTTTATAGCAAATTTGTGGCCCTTAATGTCAAATTGTTGGTTGATAATGGTGTGGCCAGTTCCAACATTTCCAGGATCCTTCGTGTGATGCCTTATGGTCTATGCTCTACTGGCTTGGGGAAGACAGTGCAGGAATTGAAAGGCCTGGGATTGGATCCTTCCAAATCATACTTTGGTGATGCATTGCTTGCCAAAAGAGATCAAAACAAATCCAAGTGGGATGAGAAATTTGATACCTTTAAGAGGTGGGGTTGGTCTGAAGAAACAATTTTGGAAGCATTTAGGAAACAGCCACAATGTATGTTAAGATCCAGCGATAAAATCAATAGGGTGATGCAGTTTTGGGTTAATCAGTTAGGTTGGGATTCTTCTTACCTTGTCAAGGGACCAGGGATCTTTTTATATAGTTTGGAGAAAAGAGTCATTCCAAGGGCTAAGGTTGTCCACTATCTTCTATCCAAAGGTTTAAAAAGTGAGAGTGCCAGTTTGGTTTCACCATTTTTTTTGCCTGAGAAGTTGTTCCTGCAAAGGTTTGTGAACTGTTTTGGTGAAGAGGAAACTTGTAAGCTTATGAAGTTATATAAGGGGTAA 1125 0.4204 MFKAFLCHNVLGVTSRSTAPRLDPLLRHLPLSFSLTFCTTTTSDPHLFAVSYIINNFGFSLESALKASKGLRFKTSEKPDSVVTFLRNHGFPDSDIRTIIRREPWLLSCDTNKRVLPKFQFLLSKGASTSDIVRMVATNPRLLKLSFENRMIPAYKLVNKFFHSEDKALACIIYCPSLLYSKFVALNVKLLVDNGVASSNISRILRVMPYGLCSTGLGKTVQELKGLGLDPSKSYFGDALLAKRDQNKSKWDEKFDTFKRWGWSEETILEAFRKQPQCMLRSSDKINRVMQFWVNQLGWDSSYLVKGPGIFLYSLEKRVIPRAKVVHYLLSKGLKSESASLVSPFFLPEKLFLQRFVNCFGEEETCKLMKLYKG 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi230g00024 374 PANTHER CGI-12 PROTEIN-RELATED 46 360 IPR003690 GO:0003690|GO:0006355
Sebi230g00024 374 SMART mt_12 133 168 IPR003690 GO:0003690|GO:0006355
Sebi230g00024 374 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Sebi230g00024 374 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Sebi230g00024 374 SMART mt_12 202 230 IPR003690 GO:0003690|GO:0006355
Sebi230g00024 374 SMART mt_12 301 335 IPR003690 GO:0003690|GO:0006355
Sebi230g00024 374 FunFam Mitochondrial transcription termination factor-like 147 364 - -
Sebi230g00024 374 Gene3D Transcription termination factor 3, mitochondrial 53 184 IPR038538 -
Sebi230g00024 374 Gene3D Transcription termination factor 3, mitochondrial 185 363 IPR038538 -
Sebi230g00024 374 Pfam mTERF 84 210 IPR003690 GO:0003690|GO:0006355
Sebi230g00024 374 Pfam mTERF 187 343 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi230g00024 Sebi-Chr230 297711 298835 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sebi230g00024 mTERF 9.8e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi230g00024 K15031 - gmx:102667698 350.903