Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi230g00023 ATGGTTTTGTTCGAGCACTTCACACCCTCACCCATTCGTTGTGTCCTACCTCATCAACAATTTTGGGTTCTCACCAGAATCCGCTCTCAGAGCTACGAAGCTTCTTCATTTAGGTTTCAAGACCTCAGAAAAGCCCGATTCAGTGGTCACTATGAATTGCTAACTAGTTTCCTCCAATCTGAGAAAAAGGTCCTTTCTCGTGTCATTCTCTGTCCATATTTGCTTTCATTCAAATGTGTGGCCCCTAATCTCAACTTGTTGATTGATAATAATGTTGCCACTTTCAACATTATCCAAATCCTTCATAAGACGCCTTATAGAAATATTATATGCTCTTCTAGCTTGGGGAAGACGGTGCAGGAAGTGAAAGACCTGGGATTTGATCCTTCCAAATCATACTTTGGTGTTACATTGCTTGCCAAAAATAATGTAAGCAAATCCAAGTGGGATGAGAAAATTGATACCTATAAGAGGTGGGGTTGGTCTGAAGAAGAAGTTTTTGAAGCATTCAGGAGGCAGCCAAGCTGTATGTTAGCATCCAATGATAAAATCAATAGGGTGATGCAATTTTGGATTAATCAGTTAGGTTGGGATTCTTCTTACCTTGTCAAGGGACCAGTGATCTTTTCATACAGTTTGGAGAAAAGGGTCATTCCAAGGGCCTCGGTTCTCCAATATCTTCTATCTAAAGGTTTGAGAAGCAAGAGAGCTAGCTTGCTTTTACCATTCATGATTTCTGAGAAGCAGTTCTTGCAAAAATTCGTGAAATGTTTTGGTGGAGAGGAAACTTCTCAGCTTATGAAGTTATATAAGGGGAAAATGAATAGTATTGAAGATATTGGAGCACAGGGAAACCATGATATGTCAGGTTCATAG 876 0.3984 MVLFEHFTPSPIRCVLPHQQFWVLTRIRSQSYEASSFRFQDLRKARFSGHYELLTSFLQSEKKVLSRVILCPYLLSFKCVAPNLNLLIDNNVATFNIIQILHKTPYRNIICSSSLGKTVQEVKDLGFDPSKSYFGVTLLAKNNVSKSKWDEKIDTYKRWGWSEEEVFEAFRRQPSCMLASNDKINRVMQFWINQLGWDSSYLVKGPVIFSYSLEKRVIPRASVLQYLLSKGLRSKRASLLLPFMISEKQFLQKFVKCFGGEETSQLMKLYKGKMNSIEDIGAQGNHDMSGS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi230g00023 291 Gene3D Transcription termination factor 3, mitochondrial 27 261 IPR038538 -
Sebi230g00023 291 Pfam mTERF 144 250 IPR003690 GO:0003690|GO:0006355
Sebi230g00023 291 PANTHER CGI-12 PROTEIN-RELATED 50 257 IPR003690 GO:0003690|GO:0006355
Sebi230g00023 291 SMART mt_12 167 198 IPR003690 GO:0003690|GO:0006355
Sebi230g00023 291 SMART mt_12 199 233 IPR003690 GO:0003690|GO:0006355
Sebi230g00023 291 FunFam Mitochondrial transcription termination factor-like 43 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi230g00023 Sebi-Chr230 290533 291490 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sebi230g00023 mTERF 3.8e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi230g00023 K15031 - gmx:102667698 231.876