Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi22g00046 ATGCTCTGCTTTGAGCATTCTGGAGTGTCGAAGCTCCACTCTGCTATGCTATGCCGCTATAACAACTATGACTTCAAACCTGTGCAGCGACCTTTCTATGAACGGTGGAGGATGCTTGAGAAAGAAGTGATTGAACCCAGGAATCAGGAACGATTCCAGAGCAAAAATCTTTACTATAGATATGACATGGAGCCATTCAGGGTGAGGAGGAAAGCTTTTTGGTTGCTCTCTACTGTCACAAAACTCTTAAACGAATTCATTCCAAAACTCTCACATGATGCAGATGGCCTCATATTTCAGGGTTGGGACGATCCTTATATACCACGCACTCATGAAGGCCTCTTAAAATGGAAATATGCTGATCTGAACTCAGTTGATTTTCTCTTTGAGATTGAAGATGATCGTCAGCTACTTTTTCTCTATGAGCGAGGAAAAAGAAACTCATGGAAGGAAGGTTCAGACCCCTTGCTTTATTCTGGAAAGATCATTGAGTGTGCTTGGGATTCTGATAAACAAGAATGGATATTCAAGCGAATCAGAACAGATAAGTCAACTCCAAATGACTTTAATACTTATAAGAAGGTGATGAAAAGTATAAGAGACAATATCACTGAGGATATCCTGTTGGATGAAATAAATGAGATAATCCGCCTTCCCATGTATGCCGACAGGATAAGAATCGATAGCAAAGCCCATCATCACACTAACATGGCTAGGCGAAGGTGA 726 0.4105 MLCFEHSGVSKLHSAMLCRYNNYDFKPVQRPFYERWRMLEKEVIEPRNQERFQSKNLYYRYDMEPFRVRRKAFWLLSTVTKLLNEFIPKLSHDADGLIFQGWDDPYIPRTHEGLLKWKYADLNSVDFLFEIEDDRQLLFLYERGKRNSWKEGSDPLLYSGKIIECAWDSDKQEWIFKRIRTDKSTPNDFNTYKKVMKSIRDNITEDILLDEINEIIRLPMYADRIRIDSKAHHHTNMARRR 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi22g00046 241 Pfam mRNA capping enzyme, C-terminal domain 144 208 IPR013846 -
Sebi22g00046 241 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 27 119 - -
Sebi22g00046 241 Gene3D - 140 218 IPR012340 -
Sebi22g00046 241 Pfam mRNA capping enzyme, catalytic domain 28 118 IPR001339 GO:0004484|GO:0005524|GO:0006370
Sebi22g00046 241 Gene3D DNA ligase/mRNA capping enzyme 17 118 - -
Sebi22g00046 241 SUPERFAMILY Nucleic acid-binding proteins 121 225 IPR012340 -
Sebi22g00046 241 PANTHER MRNA-CAPPING ENZYME 28 223 - -
Sebi22g00046 241 FunFam mRNA-capping enzyme 134 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi22g00046 Sebi-Chr22 1303660 1306003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi22g00046 28 241 Protein tyrosine phosphatase (PTP) family AT3G09100 66.216 3.21e-97 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi22g00046 K13917 - gmx:100803597 387.882