Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi229g00031 ATGTCTTCTGGTTATGAGCTACAGTCAACATTTAGGAAGAGGGTAGCCTTTCTCTTAGCTGCCTTCATTTTTCATGTGGACTCAAGAGATGGTCATAGGCAGGCAGCAGTGCCATGGCTAGAGCAACCAGGACCAGGTGCCATAACAACTCCCATGACAATTGCCTTTCAATTTCTTTTGCAGAACCTGTTGCAAAGTGAGACTGAAGGTGTTAATGATGAGAAGATTGGATTTTATGGAAGATGTGCACTTCATGCGAATGGCCCTACATGTCAGTCTTCATATGATTCTATTGATGAAATGGGCAGTCAAGAAGAAAAAAAATTCACCTGTGCCAGGACAGAGGGTTACAAGGGCCGTAGATGGGATGGCTTTCAGAATAACCACTACAGGGCCTTAAAAGCCAAGAGGGGATGCCTTGTTCCTGAAGAGCAGTTAAATGCTTGGATTCACATTAATGGGCAGAAATTGTGTTCACAGGGACTCACAAAATTTCCAGATTCAGATATTGAGCATGATTGTCGGAAGGAATATGCTCGGTACAAGCAAGCAAAGGGCTGGAAACGGCTTGTTGTATACAAATCTGGGATACATGCCCTCGGTCTTTACACTTCTCGGTTCATTTCCCGAGGTGAAATGGTTGTCGAGTATGTTGGTGAAATTGTTGGGCTACGTGTGGCTGATAAAAGAGAAAATGAATATCATTCAGGAAGGAAACTTCAGTACAAGAGTGCCTGCTACTTCTTTAGGATAGACAAAGAACATATTATTGATGCCACAAGGAAAGGGGGGATTGCTCGATTTGTTAACCACTCATGCCTGCCAAATTGTGTGGCAAAAGTGATTACTATAAGGCATGAGAAGAAGGGCGGGGACATATTTCCTGGTGAAGAGATTACGTACGATTACCACTTCAACCACGAAGACGAAGGAAAGAAGATTCCATGTTACTGTAATTCCAAAAATTGCAGGCGCTATTTGAACTGA 987 0.4306 MSSGYELQSTFRKRVAFLLAAFIFHVDSRDGHRQAAVPWLEQPGPGAITTPMTIAFQFLLQNLLQSETEGVNDEKIGFYGRCALHANGPTCQSSYDSIDEMGSQEEKKFTCARTEGYKGRRWDGFQNNHYRALKAKRGCLVPEEQLNAWIHINGQKLCSQGLTKFPDSDIEHDCRKEYARYKQAKGWKRLVVYKSGIHALGLYTSRFISRGEMVVEYVGEIVGLRVADKRENEYHSGRKLQYKSACYFFRIDKEHIIDATRKGGIARFVNHSCLPNCVAKVITIRHEKKGGDIFPGEEITYDYHFNHEDEGKKIPCYCNSKNCRRYLN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi229g00031 328 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 62 328 - -
Sebi229g00031 328 Pfam SET domain 201 303 IPR001214 GO:0005515
Sebi229g00031 328 SMART PostSET_3 312 328 IPR003616 -
Sebi229g00031 328 Gene3D SET domain 85 328 IPR046341 -
Sebi229g00031 328 SMART set_7 188 310 IPR001214 GO:0005515
Sebi229g00031 328 ProSiteProfiles SET domain profile. 188 304 IPR001214 GO:0005515
Sebi229g00031 328 ProSiteProfiles Post-SET domain profile. 312 328 IPR003616 -
Sebi229g00031 328 SUPERFAMILY SET domain 162 324 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi229g00031 Sebi-Chr229 1175069 1178553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi229g00031 189 328 C2H2 Transcription Factor Family AT2G23740 32.727 1.26e-16 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sebi229g00031 SET 1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi229g00031 - - aprc:113846680 493.812