Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi229g00005 ATGGCCATGTACACACTCACTAGTTGCTACTTAGTGTATCTTACCTTAAACTTTGTTTTGATCCATATCACATTTAACTCCACCTTCTTCACTTTCTTGCTGTTGCATCCACCACCCAAAAGAGCATTAGCCATGTCCACAATTACAAAGAGAGAGTTGGGTTCCAATGAAGAAAGTGAGCTGAGAAGAGGTCCTTGGACTCTTGAAGAAGACAGCCTACTCATACACTATATTGCTCGTCATGGTGAAGGTCGTTGGAATATGTTAGCGAAAAGTGCAGGATTGAAGAGGACAGGAAAAAGCTGCAGACTCAGATGGCTGAATTACTTGAAACCTGACTCAAGAGAGGGAACCTACTCCACAGGAACAGCTGTTGATCCTTGA 384 0.4297 MAMYTLTSCYLVYLTLNFVLIHITFNSTFFTFLLLHPPPKRALAMSTITKRELGSNEESELRRGPWTLEEDSLLIHYIARHGEGRWNMLAKSAGLKRTGKSCRLRWLNYLKPDSREGTYSTGTAVDP 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi229g00005 127 Gene3D - 60 115 - -
Sebi229g00005 127 Pfam Myb-like DNA-binding domain 63 110 IPR001005 -
Sebi229g00005 127 ProSiteProfiles Myb-like domain profile. 58 110 IPR001005 -
Sebi229g00005 127 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 57 119 IPR044676 GO:0003700|GO:0006355|GO:0043565
Sebi229g00005 127 FunFam Myb transcription factor 63 115 - -
Sebi229g00005 127 SUPERFAMILY Homeodomain-like 64 120 IPR009057 -
Sebi229g00005 127 CDD SANT 65 110 IPR001005 -
Sebi229g00005 127 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 114 IPR017930 -
Sebi229g00005 127 SMART sant 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi229g00005 Sebi-Chr229 126607 127082 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi229g00005 58 118 MYB Transcription Factor Family AT1G68320 77.049 4.35e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi229g00005 Myb_DNA-binding 6.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi229g00005 K09422 - gmx:100780759 139.428