Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi228g00023 ATGGCGTTGGTTTCTTGTGGGTATCATTATGTTAACAGCATCTGTGGGATAAGGAATAGTTGGAGGCTGAAGGTGAGACTCATCAGAATCTGGAATATGTGCGCTGTGGCCACTCCTGGTGATCCATTCGCTACCCAGATGGTTTTTGTTGATGAAGAGGGTGGTAGAATAGAGGCAACTGTGCAGAAGCATAACATGAAGAGGTTCGCAAACGTCATGGTCGAAGGACAGGTGTATAAGATAACAAACTTTGGAGTGATGCGCAACGATGGAAACTTTAGAGCCTGTGGTCACGAATTTAAGCTCAGCTTCAACGCAAATACTAAGATCACCTTTGTTCCCACTGCTGCAATACCCTATACAGGACTGGCTTTAATTAAGTGTTCTGATATTAGGAAAATCAATGGCCACTCAACTTACCTCTTTGACTTCATGGGAATTGTTACTGGAGTGTCCGAAGAAATTAATCTAAACAAGATAGGGAGGGCTACCCGATTAATGCTCTTAGATATGGTGGATGAAATGGGAAACATCAGATGTGCTATATTTGGGCAGTTGGTGGAAGCCATTCTTGGTTTCCTTGCTTCAACTGAAACAGGACTCCCTGTTGATATTATTCAAGTAGGAAGGGTTAATCTCTATAAGGATATTCCCCTTGCTGTTGAGTTCAAGAATAGCCTTGCAGTTCATGAGATTGAAACAGATGTTGCAATTTCCAGAATATCCGATAGAGCACGACCTGTTTCTACTAGAGAAGGGTTCCTCCAATTATATCCAAGGAAGAAAGTTGGGCAGCTCCATGAGATGTTTGAGGAAGGTTTTTTTATCATTATGGCTACTATCAAAGAGATTATTGAAGAGGATTTGTGGTGGTACAAGATCAAGGTTCTGGTTTTTGCTGGGGATGACAATGCTCACTTGGATCATATTCCAAGGCCAGTCTTTAAGCGGCTACAAAGAATGAAATGGGATCCCTCCGATATACTAAACTTTGTGGGAAAGGAGTTGTTGTTTCGCATAGAGAGGAAGGAGGACCCAACCTTTGGCTATGATGACTGTTTCAAAGTAAGGAGGATATGTTCTGACTCCTCCATCATTTCAGAATTTAAAGAGGACATCGCGGATGAGACTCCATTGAAGGTTGAGGTGTCACCCATTTCATTTGCTCCAACATCAGCTACTGAGGGCGAGTGCAGTGTGTTATCTAAAAGGCTTGCTGAATCACCATCTAAATGTGTTGCTGATAAGAGGAAGAGGGGAAAGAACAAGCCCTTCAAGATTGAAAGGATCTGA 1293 0.4246 MALVSCGYHYVNSICGIRNSWRLKVRLIRIWNMCAVATPGDPFATQMVFVDEEGGRIEATVQKHNMKRFANVMVEGQVYKITNFGVMRNDGNFRACGHEFKLSFNANTKITFVPTAAIPYTGLALIKCSDIRKINGHSTYLFDFMGIVTGVSEEINLNKIGRATRLMLLDMVDEMGNIRCAIFGQLVEAILGFLASTETGLPVDIIQVGRVNLYKDIPLAVEFKNSLAVHEIETDVAISRISDRARPVSTREGFLQLYPRKKVGQLHEMFEEGFFIIMATIKEIIEEDLWWYKIKVLVFAGDDNAHLDHIPRPVFKRLQRMKWDPSDILNFVGKELLFRIERKEDPTFGYDDCFKVRRICSDSSIISEFKEDIADETPLKVEVSPISFAPTSATEGECSVLSKRLAESPSKCVADKRKRGKNKPFKIERI 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi228g00023 430 Gene3D - 8 111 IPR012340 -
Sebi228g00023 430 Pfam Domain of unknown function DUF223 47 113 IPR003871 -
Sebi228g00023 430 CDD RPA1_DBD_A_like 22 110 - -
Sebi228g00023 430 Gene3D - 116 237 IPR012340 -
Sebi228g00023 430 SUPERFAMILY Nucleic acid-binding proteins 7 115 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi228g00023 Sebi-Chr228 784076 786689 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi228g00023 21 186 Core DNA Replication Machinery Family AT2G06510 25.143 1.71e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi228g00023 - - lja:Lj6g3v0884310.1 241.506