Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi227g00016 ATGGAGTTTGGCAAGTTCCAATCATTTTATTCGAGGAAGCACAATAGTCCAACAACAGGTGTCAAAATTTTGCTTGCCGATCCTGACCAAGTAAGCAGACATGTTGTGGCAACAATGCTCCAATGCCTTGGATATGAAGTTGTGATTGCTGCTAGAGCTATTGATGTATTATACATTGTTGAGGAGAACAAGGATGTGCTAAGCCTTGCAATTGTGGATTCTCGCTGGAATGACATTGAAATATACGATCTCATAGAGAAAATGAGAGAAAGCTGCACTAATCTGCCATGTTTCATTATGAGTGCTGCTCCTGTTGCTGATGAGCTTCCTATATCAATAGCAATGTATAAAGGAGCTATGTTGTTTTTTAAAAAGCCACTTTCTTTTATTCAACTAAGTGGTCTGTGGCGATTCGCAAGGAAGAATAAAATAGACAAAATGACAGTACTCAATGCAAATGGACAGGGCTTTGAGAGGTACATGGGTGTAGAATCCCAACCATTCATGAACATGAGAGGTACTTGGACTAATAATTTTTCAGAAATGTGCTATGAATCTGCTGCAATCAATGCTTTTCCTATGAGATTGCAGCACGTTATGGATGTGCCAGGACATACAGAACAGAACATTTCAAACTATGTGCAGGAAATTTCAAGTGGCCAGAATTCAACTTCTGTGCAAGATGAAATAGGTATGCCAGGGAAACTACAAAGTGCTACACACACCTCATATTGCTTTGGTGAATTCATGAACGAAGGTTATGGGGAGGCATCTACAGAAAGTAGCCAGGTTGAAAATGCTACTGATGAAAAAGCTCTCAGTGAGGACAAACTTGACTCATCTGTGGATTCTACTGATGGAGAAATTGAAATGCAATTCTCAACATTTTCGGCTAATGACATTGACAATAGTCAACAAATTTTCCCTGAACTTCTTATTCCTCCACTTCCATTAGATGAAAAAGAACATGAATTTTTTGGGGTTGAAGTAGGAAAAAGTGATGAAACTTTTTATGGTTCAAAAGAAATCGAGCAGTTCAGTGATGAGGATTTAGACACGTGGCTGTCAAGTTTTATTTCCAGTGAACTTCTAGATAAAGGCATTGAATCCATTTGGATTGACATAGGAAGAGGGTCCAAGCCTGAACTAGGGATGGATTTAAGGGGGACCAAAACCTATATGATAGAACATGAAACTCACAAGGTGTGA 1209 0.3904 MEFGKFQSFYSRKHNSPTTGVKILLADPDQVSRHVVATMLQCLGYEVVIAARAIDVLYIVEENKDVLSLAIVDSRWNDIEIYDLIEKMRESCTNLPCFIMSAAPVADELPISIAMYKGAMLFFKKPLSFIQLSGLWRFARKNKIDKMTVLNANGQGFERYMGVESQPFMNMRGTWTNNFSEMCYESAAINAFPMRLQHVMDVPGHTEQNISNYVQEISSGQNSTSVQDEIGMPGKLQSATHTSYCFGEFMNEGYGEASTESSQVENATDEKALSEDKLDSSVDSTDGEIEMQFSTFSANDIDNSQQIFPELLIPPLPLDEKEHEFFGVEVGKSDETFYGSKEIEQFSDEDLDTWLSSFISSELLDKGIESIWIDIGRGSKPELGMDLRGTKTYMIEHETHKV 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi227g00016 402 ProSiteProfiles Response regulatory domain profile. 22 140 IPR001789 GO:0000160
Sebi227g00016 402 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 251 IPR045279 GO:0009736
Sebi227g00016 402 SUPERFAMILY CheY-like 20 141 IPR011006 -
Sebi227g00016 402 MobiDBLite consensus disorder prediction 256 282 - -
Sebi227g00016 402 Gene3D - 9 149 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi227g00016 20 154 Response Regulator Gene Family AT2G25180 25.926 5.54e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi227g00016 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi227g00016 - K11329 psat:127075863 144.05