Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi227g00010 ATGCTCACAAGGGTTTCTTCAACCCCACCTGCTCCACACACTGACCATGGTCATATAGATTCAAATGATGAAAGAACTTTGCAGCAGGAGCAGGGTGGTAATCATCAAATACATTGCTCTAGAGATAGAAGTAGAATAGCATGGAAAATCATTCAAGAGTATTTGATGCCCTTTGTGGAGAAAGAAAAATTTCCTATCTCAAGAAAGTGTAGGCTACACCCTGACAATGATATATACAGAGATCAGGAACAACATAAATTTCATAAAGATATAAATGAATGGCAATGTGGATACTGTAAGAAAAGTTTCTATGAAGAGAAACATCTTGATCAGCATTTCGACAACAGACACTCCAATTTACTGAATTTGAATGAAAGCCGGTGCTTAGCAGATGTATGTGGTGCATTGCACTGTGACCTTGAAATGAAGTCTGGGACAAAAAAATCAAAGTGCAATCCTGCTGCTGCTGCAAGAAATAAACATCTATGTGAGAGCTTAGCCGATAGTTGTTTTCCGGTTAACGAGGGCCCTGCAGCAAGCCGACTTCATGAATTCTTCTTGCACCAATTCTGTGATGCACACAGCTGCACTGGAAGTAGGAAACCTTTCTCCAGAGGGCGCAGGAAGAGGACAAATGTGTTCTACCTCGTTGCCTCCATTTTTCTTGTGATGCTGCTGCTACTTTACTATCTTTACATTTACTTGTATCAGAGGAATGAAAAGGGAAACACAAGTGCTAAAGCGTATCTCACAAACCAGCAGAAAGAAAAAGCCATCTTAGTTGATAGATCTTTCCCTTCAGAAGTTCTCAACCTACTTTTTTAG 825 0.4024 MLTRVSSTPPAPHTDHGHIDSNDERTLQQEQGGNHQIHCSRDRSRIAWKIIQEYLMPFVEKEKFPISRKCRLHPDNDIYRDQEQHKFHKDINEWQCGYCKKSFYEEKHLDQHFDNRHSNLLNLNESRCLADVCGALHCDLEMKSGTKKSKCNPAAAARNKHLCESLADSCFPVNEGPAASRLHEFFLHQFCDAHSCTGSRKPFSRGRRKRTNVFYLVASIFLVMLLLLYYLYIYLYQRNEKGNTSAKAYLTNQQKEKAILVDRSFPSEVLNLLF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi227g00010 274 MobiDBLite consensus disorder prediction 1 21 - -
Sebi227g00010 274 ProSitePatterns Zinc finger C2H2 type domain signature. 96 117 IPR013087 -
Sebi227g00010 274 PANTHER ZINC FINGER PROTEIN-RELATED 29 248 - -
Sebi227g00010 274 SUPERFAMILY Expressed protein At2g23090/F21P24.15 82 119 - -
Sebi227g00010 274 ProSiteProfiles Zinc finger C2H2 type domain profile. 94 119 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi227g00010 Sebi-Chr227 201157 204702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi227g00010 36 244 C2H2 Transcription Factor Family AT5G63280 63.636 4.13e-99 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sebi227g00010 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi227g00010 - - lang:109338698 424.861