Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi225g00021 ATGTTAATTAGGCCACAGTATGCGGAGATTGAAAAGATTGTTGAAGAAGTAATTCGTATATTAGATCACAATTTTTCAACTCCTCCAACTGATGTAATCGGGATGCATTCTCCTATAGAAGAATTAGAAAAGGTTTTACTTTTGGACTCAGTTGATGATGTTCGGATTGTAGGAATTTGTGGGATGGGTGGAATAGGCAAGACCACTCTTGCTACTGCTTTATACGACAAAATCTCTAATCAATATGATGCTTGCTGTTTTATTGATAACGCTCTTGTAGTTCTTGACAATGTTGATCAAGTTAAGGATCTACAGAACTTGGTTGCGAATCGTGAATGGTTTGGTGCAGGGAGTAGAGTCATTATAATTTGTAGAGATGAGCATATTTTGAAAGAGTATGGAGTGGATGCAGTTTTTAAAGTTCCACTCATGAATTTTGATGATGCTGAGCAATTGTTTTGTAGAAAAGCTTTCAAATGTGATGATATTATTAGAGATTATGAAGAGGAAGAGAACGTTGAAGCCATAGTTCTCAATGATCCATATGAAGAAGAAAAATTAATGGTTGAAGTATTGTCAAAAATGAGTCATCTTAGATTACTCATACTTCATGAAGTGAAATTTTCAGGAAGTCTTAATTGTCTTTCTAATAAATTAAAATATGTTGATTGGCATGAATACCCTTTCATGTATCTCCCATCAAGTTTTCAGCCCAATCAACTTGTTGAATTGATTTTGAAGGATAGCAACATCAAACAACTATGGGAAGGCAAGAAGCATTTGCCTAGTTTGAGAACTATGGACCTTAGCCACTCCAAATATCTAATCAAGATGCCAGATCTTGGAGACGCCCCAAATCTTGAGTGGCTAAATCTTGAAGGGTGTATAAAACTTGTGCACATTGATCGATCCATTGGTCTTCTAGAAAAGCTTATTTTCTTGAATTTGAAAGATTGCAAAAATTTAGCAAGTATACCCGAGAACATTTTGGGTCTTAGTAATCTTGAGTATCTAAATCTCTTAGGTTGTTCAAAAGTGTTTAACAAGCAGCTATTGGATAAAGCAGAGAATGCAGAGCATTTGAAGAAGCTTGATATGAGCGAAGCTACATTACATTCCCAATCAACTTCCTCTATCTTGAAATGGATTATGTTTCCTTTCAATTTCTTGTATACTAGAGGGTACAAAGATTCAGCTACTTGTTTGTTGCCTTCCTTGCCTAACTTCTCTTGTTTGCGAGAACTTGATATCAGTTTTTGCGGTCTCAGCCAAATCCCTAATGCTATTGGATGTATACTTTGTTTAGAGAGATTAAATTTAGGAGGAAACAATTTTGTCACACTACATTGTAGCTTCAAGGAGCTCTCTAAACTTGTGTATTTGAACTTGGAGCATTGCAAGCATTTGAAGTCTTTGCCTGAGCTTCCTTCACGTACTTGCTTGCCAGTGGGAGGAGAATTTCTAATTGGTAAAAAACCACCAGGATCTTATATTTTCAACTGCCCCAAATTGTGTGAGAGGGATTGCAGCAGCATGAGTTTCTCATGGATGATACAACTCCTTCAGGTGAACAATGAATCCCCTTCCTCTATTGATAGAATTAATGTTGTCGTTCCTGGAAATGAAATACCAAAGTGGTTCAACATTCAGAGTGTGGGTAGTTCCATGAGGATAGATCCATCTCCTATTATGGAAGACAATAGTTGGATTGGTGTTGCTTGCTGTGCAGTATTTATGGCACTTGATGATCCAACTACTTGGAAAAATGAATGGGAACCAGAACCAGATATAATGATAGGTTTTCAAAATAAAGGGGTTGGGCGTTATTTTGGTATTCCAATAATTCTCAATAGAGATCTTATCACAGTGAAATCAAATCACTTGTGGCTAATCTATTTCACTCGGGAAACGTTCTTTGATTTTGTGCGCAATAAAGACAGAATACTCAAGAAGGATGTTGATGATATCAAAATGGAAGTTCTATCCAATGACGCCAAAGGGTTGCGTATAGAGGTGAAGAATTGGGGGTATCGTTGGGTATATAAACAGGATCTTGAGCTATTGAACCAAAATGGAAATTCTTTTGCTCGGAAGCGCAAGTTTTTGGAAATTGAAAATGAGGCACAAGCACAATCATAA 2139 0.367 MLIRPQYAEIEKIVEEVIRILDHNFSTPPTDVIGMHSPIEELEKVLLLDSVDDVRIVGICGMGGIGKTTLATALYDKISNQYDACCFIDNALVVLDNVDQVKDLQNLVANREWFGAGSRVIIICRDEHILKEYGVDAVFKVPLMNFDDAEQLFCRKAFKCDDIIRDYEEEENVEAIVLNDPYEEEKLMVEVLSKMSHLRLLILHEVKFSGSLNCLSNKLKYVDWHEYPFMYLPSSFQPNQLVELILKDSNIKQLWEGKKHLPSLRTMDLSHSKYLIKMPDLGDAPNLEWLNLEGCIKLVHIDRSIGLLEKLIFLNLKDCKNLASIPENILGLSNLEYLNLLGCSKVFNKQLLDKAENAEHLKKLDMSEATLHSQSTSSILKWIMFPFNFLYTRGYKDSATCLLPSLPNFSCLRELDISFCGLSQIPNAIGCILCLERLNLGGNNFVTLHCSFKELSKLVYLNLEHCKHLKSLPELPSRTCLPVGGEFLIGKKPPGSYIFNCPKLCERDCSSMSFSWMIQLLQVNNESPSSIDRINVVVPGNEIPKWFNIQSVGSSMRIDPSPIMEDNSWIGVACCAVFMALDDPTTWKNEWEPEPDIMIGFQNKGVGRYFGIPIILNRDLITVKSNHLWLIYFTRETFFDFVRNKDRILKKDVDDIKMEVLSNDAKGLRIEVKNWGYRWVYKQDLELLNQNGNSFARKRKFLEIENEAQAQS 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi225g00021 712 Gene3D - 17 91 IPR027417 -
Sebi225g00021 712 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 174 IPR027417 -
Sebi225g00021 712 Pfam NB-ARC domain 40 86 IPR002182 GO:0043531
Sebi225g00021 712 PRINTS Disease resistance protein signature 56 71 - -
Sebi225g00021 712 PRINTS Disease resistance protein signature 453 469 - -
Sebi225g00021 712 Pfam C-JID domain 538 686 IPR045344 -
Sebi225g00021 712 SUPERFAMILY L domain-like 190 516 - -
Sebi225g00021 712 Pfam Leucine Rich Repeat 240 259 IPR011713 -
Sebi225g00021 712 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 90 IPR044974 GO:0006952
Sebi225g00021 712 Gene3D Ribonuclease Inhibitor 184 348 IPR032675 -
Sebi225g00021 712 Gene3D Ribonuclease Inhibitor 349 527 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi225g00021 Sebi-Chr225 743160 748024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi225g00021 191 438 WRKY Transcription Factor Family AT4G12020 36.140 9.29e-29 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi225g00021 - - gmx:100820213 557.37