Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi225g00003 ATGTCCTTCAATCAATCAAAGTCCGATAAGAGCGACGCTGTGTACCGAAAATCCGGGCGATCCGCCAGCTTCAATCAGCAGCGAGGTTCATCCGGCGGTGCCTACGTCAAGGGCGGCGGCGCGGCCGTGCCTTCACCGTCACTCTCCTCTAGTCGGAGGGTAAACCCTCCCCCGGTGAATTCAGCTGAGTCTAATAGTGCTCATGCAGCCCGGACCATACCAAATGGTTCCATGTACAGCCGCACCATCATGAGTTGTTCCAAAAGCTCCTACTTCTCAACCCCCGCCATGAATTCTGAGCCAGCAGCTCCTACCACCCCTGCTAAGGGAGATGCATCTAAGGCATTCCCTTTTCAATTCGGATCTATTAGTCCCGGCTTTATGAATGTGATGGCAATTCCTGCTCGCACAAGCTCCGCTCCTCCTAATATAGATGAGCAGAAGCGTGATCAGACCTTGCCTTCAGTGCCAGCACCTCCTGTTCCAAAGCATCAGCCAGCGAAAAAGGATACAGGTGTCTCTGATCTATCTAACGCTGGTGAAACTTATACAGGGACTAGGACAAAAAAGGATACTCAAGTTTCACCTTTACCCCCAGCAAGCCACATGCAGAAGCCTTCTGTTATTCCTATAACTGGAATTTCTATGGCTATGCCATTCACCAGTCACAGGCATCTGTACACTTTGGTGGTCCCAATCACAGATTCAGTCTCAGGTCTTCAACCTCATCCAATCCATCCTCAAGGAATTATGCATCAAGGCCAAAGCATTGGTTTCACTCCTCAAATGGGTCCTCAATTGCCCCATCAGTTAGGCAACATGGGTATTGGCATCAGCCCACAATATACCCCACAGCAAGGAGGAAAATTTGCTGGCCCTCGTAAAACTACTACTGTTAAAATAACTCATCCTGAGACACATGAAGAGCTTAGGCTTGATAAAAGGGCTGATACATATTCAGATGGTGGGTCATCTGGTGCTCGGTCTCATTCTGGCATGCCTTCTCAATCTCAGCCTGTCCAGCCATTTGCAGCTTCTCATCCTATTAGTTACTATCCATCCAGTTCCTACAGTACAAGTTCTCTCTTTTATCCACCTCCTAGCTCTCTTCCATTATCAAGTAGCCAGATAACTCCTAACTCTCAGCCTCCAAGAATTATTATGCAGGGAGCCATGGTCTGCAAAATAATTTCCCGTGATGTGCAAAATGCAATCTCATTACCTCCATCAGGAGTAAATTCTGTGTCTATTAAGCCAAGTGATGTGTCTGTTGTTGTGGACTCGAGCATTTCTGGTGTTCAAAAGAGTGGATCTCCTAGTTCTTCAGTAACATCTGGTGATGTTAGCTCTTCTGTGCCACCAAAAGGGTCTGAAACCTGTTCTGAAATTTCTTCACAACAATCTATTGCTGCATCTGCTGTCACTGAGGATTCTGTTTCAGTTGTGTCTAATAATGACGAAAAGAAAGAAGCACGTAGGTCAATTCTTGAAGGTTACTGTACAATCTGCTGCTTGGCTGAAGAACCTTCCCAAGTTGTTGATGGTGGTATCTCTGATAGAGGAGCTTCTGAAACCATAGGAACTAGAACAAACCATTCTGAAGCAATAGCCAGTAAAGATCTCTCAGCAGCAGCTTCAGATACAACTGCCAGTGAGGGCATACCTTATGCTGTTGAAGTGAAGACAAATGATTCTAGTGAGATTTCTGCTTGTGCTTCAGCTGAAGGACCTGTTACTCAAGCCGTGGATAGTTTGAACAATCATAAGAATGATGAACTGGATGGATTATCACAACAGGATAAACTGTTAAAGCAGAACATTTTGGATATAGGTGGTAAAAATGAAAATTCATCTCTTCAGAATGTGAAAATATCACCCATGGATGAATCTACAAGTTGTCTTGCAGAATGTGACAGGATGACGGATAATTTAGGCTTGTCTACCTCTACTGCATTGGATTCTAAAGATGTTTCTTTGAACAAAAATGATAGTGTTGTTGCTAACGAAGCTATTGCTACAAATTCTGGCATATCAGATCAGCAATCTGCTGATCTTCTAGAAACAACTTCAAAAAATTGCAAGGATAGTTCAGAGAATGCTGACAGTGATTTACTGTCTCTTCCAGCAGCATCAGGTACCAAGGACAGACCAATTTTAGAGCCAAGTAAGGGACCTGAGGAAAAGAAAGAAGCTGTTGTAAGTTCAGAGAAAACTGAAAGTGTTTCCACTTCCGGAAATTTGGAGCAGTTGCCTACGGATGCCGCTCAGCCAGATGATATTGCAAGTGAACAGAGTAAAGCTGAACTTGATGACTGGGAGGATGCTGCTGACATGTCTACACCAAAACTAGAAGTTCCAGATAAAAATGAACATGTTACTGATGGGAGTGCAGTTACTGCCAAAAAGTACTCTCGAGATTTCCTTTTGATGTTTGCAGACCAATGCACTGATCTTCCAGAAGGGTTTGAAATCAAAAAAGACATAGCTGAGGCTTTGATGAGTGCTAATATCAGTTCTCATGTTTCTGAACGAGATTCACATCCTTCTCCTGGAAGGGTTATAGATAGGTCAGGTCGGATGGATCGTCATGGGAGTGGTGTTATTGAGGAAGACAAATGGAGTAAAGTTTCTGGTGCTTTTCATTCTGGTATGCGTTTGGATGGTATTGGAGGTAATGCAGGATTTCGACCTGGCCAAGGAGGCAATTTTGGTGTTTTAAGGAATCCACGCACACAAACCCCTCTGCAATATGCTGGAGGGATTCTTTCTGGGCCAATGCAATCCATGGTAAATCAGGGAGGAATGCAAAGAAACAGCCCTGATAGTGAAAGGTGGCAGCGTGCTGCTAGCTTCCAGCAGCGGGGTTTAATTCCTTCTCCATCTCCCCAATCTCCTTTACAGATGATGCACAAAGCTGAGAAAAAGTATGAGGTGGGTAAAGTGACAGATGAGGAAGAGGCGAAGCAGAGGCAGCTGAAAGGTATATTGAACAAGTTAACTCCTCAGAATTTCGAGAAGCTTTTTGAGCAGGTAAAAGCAGTTAATATTGACAATGCAGTCACTCTCACTGGTGTCATCTCACAAATCTTTGAGAAGGCCTTGATGGAGCCTACCTTCTGTGAAATGTATGCCAATTTCTGTGCACATCTGGCAGCTGCGTTGCCTGATCTCAGTCAAGATAATGAAAAGATAACTTTTAAGAGATTATTATTGAACAAGTGCCAGGAAGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTAACAAGGCTGATGAAGGTGAGGTGAAACAGTCTGTTGAGGAAAGAGAAGAGAAACGAACCAAGGCTAGAAGGCGCATGTTGGGTAATATCAGATTGATTGGAGAACTATATAAAAAGAAAATGTTGACAGAGAGGATAATGCATGAGTGCATCAAGAAGTTACTTGGTCAGTATCAGGATCCTGATGAAGAGGATATTGAAGCCTTGTGCAAGCTGATGAGTACTATTGGAGAGATGATTGACCATCCTAAAGCCAAGGAACATATGGATGCATACTTTGAAAGGATGAAATTATTATCAAACAACATGAATTTATCTTCTAGGGTTAGGTTCATGTTGAAGGATGTCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGAAAAGTTGAAGGTCCAAAGAAAATTGAAGAGGTGCACAGAGATGCTTCCCAAGAGAGGCAGGCCCAAGCTAGTAGGCTGGGTCGTGGTCCAGGCAACAATGCAGCAAGGAGGATGCCTATGGAATTTGGTCCGAGAGGGTCATCTATGTTATCTCCTAATGCTCAGATGGGTGGAGTGCGTGGGTTGCCTACCCACGTTCGTGGGTTTGGTTCTCAGGATGTTCGTATGGATGAAAGGCAATCTTATGAGGCTAGGACATTGTCAGTTCCCTTGCCTCAAAGACCTTTAGGTGATGATTCAATAACATTGGGACCCCAGGGTGGTCTTGCTAGAGGAATGTCCATTAGAGGTCCACCTGCGGTTTCAAGTTCGACTGGTCTTAATGGTTATAGCAATTTAGTGGAGCGTGCTCCCTACAGTTCGAGGGAAGACCTCACACCAAGATATGTTCCAGATAAATTTTCTGGTCCAACTGCTTATGATCAATCCAGTTTTCAAGACCGCAATATGAATTATGGTCACAGGGACTTGAGAAATGCAGATAGAATTCCTGATAGAGCTGTTATAACCTCACCTCCTGCTCGAGTGCAAGGAACAGCAGGCTCCCAGAGCACTTCTTCAGAGATGGGTTGGTCAGAGGAGAGACTGCAGGACATGTCCATGGCAGCAATCAGAGAATACTATAGTGCTAGAGATGTGAATGAAGTTGTTTTATGTGTCAAAGATCTGAACTCACCAAGCTTTCATCCTTCCATGGTTTCTCTCTGGGTCACGGACTCATTCGAGAGAAAGGACACAGAGAGAGATCTTTTGGCCCAACTGCTAGTCAACCTTGTGAAATCTAATGATGGCACCTTAAATCAAGCCCAGCTCATCCAAGGGTTTGAATCTGTTCTCAGTACTTTGGAAGATGCGGTTAATGATGCCCCGAAAGCACCAGATTTCTTGGCCGCATTTTTGCCAAGACTATAA 4620 0.4418 MSFNQSKSDKSDAVYRKSGRSASFNQQRGSSGGAYVKGGGAAVPSPSLSSSRRVNPPPVNSAESNSAHAARTIPNGSMYSRTIMSCSKSSYFSTPAMNSEPAAPTTPAKGDASKAFPFQFGSISPGFMNVMAIPARTSSAPPNIDEQKRDQTLPSVPAPPVPKHQPAKKDTGVSDLSNAGETYTGTRTKKDTQVSPLPPASHMQKPSVIPITGISMAMPFTSHRHLYTLVVPITDSVSGLQPHPIHPQGIMHQGQSIGFTPQMGPQLPHQLGNMGIGISPQYTPQQGGKFAGPRKTTTVKITHPETHEELRLDKRADTYSDGGSSGARSHSGMPSQSQPVQPFAASHPISYYPSSSYSTSSLFYPPPSSLPLSSSQITPNSQPPRIIMQGAMVCKIISRDVQNAISLPPSGVNSVSIKPSDVSVVVDSSISGVQKSGSPSSSVTSGDVSSSVPPKGSETCSEISSQQSIAASAVTEDSVSVVSNNDEKKEARRSILEGYCTICCLAEEPSQVVDGGISDRGASETIGTRTNHSEAIASKDLSAAASDTTASEGIPYAVEVKTNDSSEISACASAEGPVTQAVDSLNNHKNDELDGLSQQDKLLKQNILDIGGKNENSSLQNVKISPMDESTSCLAECDRMTDNLGLSTSTALDSKDVSLNKNDSVVANEAIATNSGISDQQSADLLETTSKNCKDSSENADSDLLSLPAASGTKDRPILEPSKGPEEKKEAVVSSEKTESVSTSGNLEQLPTDAAQPDDIASEQSKAELDDWEDAADMSTPKLEVPDKNEHVTDGSAVTAKKYSRDFLLMFADQCTDLPEGFEIKKDIAEALMSANISSHVSERDSHPSPGRVIDRSGRMDRHGSGVIEEDKWSKVSGAFHSGMRLDGIGGNAGFRPGQGGNFGVLRNPRTQTPLQYAGGILSGPMQSMVNQGGMQRNSPDSERWQRAASFQQRGLIPSPSPQSPLQMMHKAEKKYEVGKVTDEEEAKQRQLKGILNKLTPQNFEKLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCAHLAAALPDLSQDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKQSVEEREEKRTKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSNNMNLSSRVRFMLKDVIDLRKNKWQQRRKVEGPKKIEEVHRDASQERQAQASRLGRGPGNNAARRMPMEFGPRGSSMLSPNAQMGGVRGLPTHVRGFGSQDVRMDERQSYEARTLSVPLPQRPLGDDSITLGPQGGLARGMSIRGPPAVSSSTGLNGYSNLVERAPYSSREDLTPRYVPDKFSGPTAYDQSSFQDRNMNYGHRDLRNADRIPDRAVITSPPARVQGTAGSQSTSSEMGWSEERLQDMSMAAIREYYSARDVNEVVLCVKDLNSPSFHPSMVSLWVTDSFERKDTERDLLAQLLVNLVKSNDGTLNQAQLIQGFESVLSTLEDAVNDAPKAPDFLAAFLPRL 1539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi225g00003 1539 SUPERFAMILY ARM repeat 983 1213 IPR016024 -
Sebi225g00003 1539 MobiDBLite consensus disorder prediction 171 200 - -
Sebi225g00003 1539 MobiDBLite consensus disorder prediction 839 864 - -
Sebi225g00003 1539 MobiDBLite consensus disorder prediction 845 864 - -
Sebi225g00003 1539 MobiDBLite consensus disorder prediction 322 342 - -
Sebi225g00003 1539 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 277 1537 IPR045208 GO:0003743
Sebi225g00003 1539 MobiDBLite consensus disorder prediction 1 73 - -
Sebi225g00003 1539 MobiDBLite consensus disorder prediction 1080 1108 - -
Sebi225g00003 1539 ProSiteProfiles MI domain profile. 1431 1539 IPR003891 -
Sebi225g00003 1539 MobiDBLite consensus disorder prediction 1216 1253 - -
Sebi225g00003 1539 MobiDBLite consensus disorder prediction 91 110 - -
Sebi225g00003 1539 MobiDBLite consensus disorder prediction 692 770 - -
Sebi225g00003 1539 MobiDBLite consensus disorder prediction 692 706 - -
Sebi225g00003 1539 MobiDBLite consensus disorder prediction 1360 1383 - -
Sebi225g00003 1539 FunFam Eukaryotic translation initiation factor 4G 989 1224 - -
Sebi225g00003 1539 MobiDBLite consensus disorder prediction 1216 1235 - -
Sebi225g00003 1539 Pfam MIF4G domain 989 1211 IPR003890 GO:0003723|GO:0005515
Sebi225g00003 1539 SMART ma3_7 1432 1539 IPR003891 -
Sebi225g00003 1539 SMART if4_15 989 1211 IPR003890 GO:0003723|GO:0005515
Sebi225g00003 1539 Gene3D - 1424 1539 - -
Sebi225g00003 1539 MobiDBLite consensus disorder prediction 18 32 - -
Sebi225g00003 1539 FunFam Eukaryotic translation initiation factor 4G 1425 1539 - -
Sebi225g00003 1539 Coils Coil 1071 1091 - -
Sebi225g00003 1539 Pfam MA3 domain 1438 1539 IPR003891 -
Sebi225g00003 1539 MobiDBLite consensus disorder prediction 431 464 - -
Sebi225g00003 1539 MobiDBLite consensus disorder prediction 736 751 - -
Sebi225g00003 1539 MobiDBLite consensus disorder prediction 138 205 - -
Sebi225g00003 1539 MobiDBLite consensus disorder prediction 44 73 - -
Sebi225g00003 1539 MobiDBLite consensus disorder prediction 303 318 - -
Sebi225g00003 1539 MobiDBLite consensus disorder prediction 719 735 - -
Sebi225g00003 1539 MobiDBLite consensus disorder prediction 303 342 - -
Sebi225g00003 1539 Gene3D - 989 1224 - -
Sebi225g00003 1539 SUPERFAMILY ARM repeat 1426 1538 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi225g00003 Sebi-Chr225 161904 170514 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi225g00003 1 1536 Eukaryotic Initiation Factors Gene Family AT3G60240 43.103 0.0 1077
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi225g00003 K03260 - gmx:100796636 2052.71