Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi224g00086 ATGGAGAATGGCTGGAACTGGGATCAGAACACACTCGTCAATGAGCTAATTCAGGGGATGGAAGTAGCAAGAAAGTTGAAGGAAGACTTGAGGACACCATATTCTGCTGACACAAGGGATTTGCAGGTGCAGAGGATATTATCTTCTTATGAAAAGGCTCTACAAATTTTAAGATGGAATGAATCAACTTCCAAGTTGCAGACCATGAGTCCAGCAACAACTTTGTTGCCAGAGTCCCCAATGTCTACCAATGGAAGTCCTCTAAGAGAGGAAGTTGATGGGGCCGTCCAGGATTACCAGGAGGTTAAGCAGGATTCAAAGAAAAGAAAGATTATGCCCAAATGGATGGACCAAATAAGAGTGAGCTTTGAGAGTGGCCTTGAAGGACCACATGAAGATGGCTACAACTGGAGAAAATATGGTCAGAAAGACATCCTCGGTGCCAAATATCCCAGAAGTTACTATAGGTGCACCTTCCGCAACACACAGAACTGCTGGGCCACAAAGCAAGTACAGAGATCAGATGAAGATCCAACAATATTTGACATAACTTACAGAGGAAGGCATACCTGTTCTCAGGGAAATAATGCCGCTCTGCCACATAAGTCACCAGACAAACAAGAGAAACCACGCAGTCTTAATAATGATATTCACCATGCACAGCCATCCCAAGAAAGCCTTACAAAGTTTAGAAACACCTTGACCATCAAAACGGATAACTTGGGAAATGAAGGAATGGCATGTCCTTTCACTTTCCCTTCCACTTCATTTGAATGCATGACACAAGAAAACCACAACTTGATTCCTTTGGCCTTAGAGAATGATCCCTTCTTGGGCAGCCTTTTCCAAACACACTTGTCATCTCCAACAACACCAGAATCAAACTATTTTTCATCTCCAACTTTCCAGATGAATGAGTTTGACGGGTTCTATAACAAGCCGCATTCAGAATCTGATATTACTGAGATCATTTCCACCAACACATCAGCCACCAACTCTCCAATTCCCGATTTCAATTTCTCACTTGATCCTGTGGAAATTGATCCAAACTTCCCTTTCAATACTCCAGGCTTTTTCTGCTGA 1083 0.4275 MENGWNWDQNTLVNELIQGMEVARKLKEDLRTPYSADTRDLQVQRILSSYEKALQILRWNESTSKLQTMSPATTLLPESPMSTNGSPLREEVDGAVQDYQEVKQDSKKRKIMPKWMDQIRVSFESGLEGPHEDGYNWRKYGQKDILGAKYPRSYYRCTFRNTQNCWATKQVQRSDEDPTIFDITYRGRHTCSQGNNAALPHKSPDKQEKPRSLNNDIHHAQPSQESLTKFRNTLTIKTDNLGNEGMACPFTFPSTSFECMTQENHNLIPLALENDPFLGSLFQTHLSSPTTPESNYFSSPTFQMNEFDGFYNKPHSESDITEIISTNTSATNSPIPDFNFSLDPVEIDPNFPFNTPGFFC 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi224g00086 360 Pfam WRKY DNA -binding domain 132 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi224g00086 360 ProSiteProfiles WRKY domain profile. 126 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi224g00086 360 SMART WRKY_cls 131 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi224g00086 360 MobiDBLite consensus disorder prediction 192 225 - -
Sebi224g00086 360 FunFam WRKY transcription factor 53 117 194 - -
Sebi224g00086 360 SUPERFAMILY WRKY DNA-binding domain 130 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi224g00086 360 Gene3D WRKY domain 118 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi224g00086 360 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 7 292 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi224g00086 Sebi-Chr224 1053983 1055298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi224g00086 6 352 WRKY Transcription Factor Family AT4G11070 39.665 7.26e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi224g00086 WRKY 1.7e-26 CL0274