Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi224g00077 ATGCAAGAAATTAGAAAAGCAGAGCTTGAACTCCTCCACGATGGTGTTGATATCGGATCATGCTTATCAAATCTCATATTATCAAGCACCACAAACACCCTCGACTCAATTTTCTCTTATTGCTCGCCACCAAACGCCACTAATACCTTGGAGACATTAACCTCTTTTGGTTCCTCGGTGTACCACCGCCAAAGAGACATCCTTCAAAAGTTCTATCACGAAAATCGTTTGAGGTTGATGAGTGAATCTTATGTTCCCAATTGCTTGAAAAATCCAGTCTTTAACAAAAAAGCATACAGGGGAGTGAGACAGAGGCACTGGGGAAAATGGGTAGCAGAGATTAGATTCCCTCAGAACAGAATGAGGGTGTGGTTGGGCACTTATGAGACTCCTGAAGCTGCTGCTTATGCTTATGATTGTGCTGCTTCTAAGCTCCGAGGAGAATACGCGCGTTTGAATTTCCCTGACGTGAAGGACCCATCTAACTTACTCGGATTTGGAGATGATTCTACCAAATTGAATGCTTTGAAGAGCTCCGTGGATGCTAAGATTCAAGCCATATATCAAAAGATGAAGAGAAACAAGTCCAAGAAACGTGCTGCTAAGAAACTCAAGTCTGAGTCATCACCTTGTTCATTGCCGTCAATGTTTTGTGATGGGGCAAACGAGTTTCTGTGGCCTAATGTTTCAGATGATGGAATTTGGAAAGGAGAGTACTCTCCTCCATTAGTCTCTGTTTCAACAGAGTGTACTACAACAATGAGAACAGAGGAGTTAGATTTCCAAGATTGTTCATTGGCAAGGATACCATCCTTTGATCCTGAATTGATTTGGGAAGTTTTATCTAATTAG 852 0.419 MQEIRKAELELLHDGVDIGSCLSNLILSSTTNTLDSIFSYCSPPNATNTLETLTSFGSSVYHRQRDILQKFYHENRLRLMSESYVPNCLKNPVFNKKAYRGVRQRHWGKWVAEIRFPQNRMRVWLGTYETPEAAAYAYDCAASKLRGEYARLNFPDVKDPSNLLGFGDDSTKLNALKSSVDAKIQAIYQKMKRNKSKKRAAKKLKSESSPCSLPSMFCDGANEFLWPNVSDDGIWKGEYSPPLVSVSTECTTTMRTEELDFQDCSLARIPSFDPELIWEVLSN 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi224g00077 283 PRINTS Ethylene responsive element binding protein signature 99 110 IPR001471 GO:0003700|GO:0006355
Sebi224g00077 283 PRINTS Ethylene responsive element binding protein signature 121 137 IPR001471 GO:0003700|GO:0006355
Sebi224g00077 283 ProSiteProfiles AP2/ERF domain profile. 98 155 IPR001471 GO:0003700|GO:0006355
Sebi224g00077 283 Gene3D AP2/ERF domain 97 156 IPR036955 GO:0003700|GO:0006355
Sebi224g00077 283 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 28 281 - -
Sebi224g00077 283 SMART rav1_2 98 161 IPR001471 GO:0003700|GO:0006355
Sebi224g00077 283 SUPERFAMILY DNA-binding domain 98 156 IPR016177 GO:0003677
Sebi224g00077 283 FunFam Ethylene-responsive transcription factor 2 97 156 - -
Sebi224g00077 283 Pfam AP2 domain 99 148 IPR001471 GO:0003700|GO:0006355
Sebi224g00077 283 CDD AP2 99 157 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi224g00077 Sebi-Chr224 998648 999499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi224g00077 17 283 AP2-EREBP Transcription Factor Family AT1G64380 44.308 6.41e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi224g00077 AP2 3.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi224g00077 - - qsa:O6P43_024033 289.656