Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi224g00058 ATGGAGGACGATGAAACCAAAGGAAGAATCGAAGAAACTGTTCGGAGGATTTTGGAAGAATCAGACATGGACAAGGGTGTTTCCAAGGACAAGGAGTTCGATGATGAGGGCGATCTCATCATCTGCAAGCTTTCAGAGAAGAGAAAGGTGACCATTCAGGATTTCAGAGGAAAAACCTTGGTCTCCATTCGGGAGTTTTATAGAAAAGATGGCAAAGAGCTTCCTACTTCCAAAGGAATAAGTTTGACAGAGGAGCAGTGGTCAGCCTTCAAGAAAAATGTGCCTGCCATAGAAAAAGCCATTAAGAAAATGGAGTCACGCACATAA 327 0.4312 MEDDETKGRIEETVRRILEESDMDKGVSKDKEFDDEGDLIICKLSEKRKVTIQDFRGKTLVSIREFYRKDGKELPTSKGISLTEEQWSAFKKNVPAIEKAIKKMESRT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi224g00058 108 PIRSF RNA_polymII_KELP 3 108 IPR017415 -
Sebi224g00058 108 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 31 107 IPR045125 GO:0003713|GO:0060261
Sebi224g00058 108 FunFam RNA polymerase II transcriptional coactivator KELP 31 107 - -
Sebi224g00058 108 SUPERFAMILY ssDNA-binding transcriptional regulator domain 41 104 IPR009044 GO:0003677|GO:0006355
Sebi224g00058 108 Gene3D Transcriptional Coactivator Pc4; Chain A 31 108 IPR009044 GO:0003677|GO:0006355
Sebi224g00058 108 Pfam Transcriptional Coactivator p15 (PC4) 42 93 IPR003173 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi224g00058 Sebi-Chr224 761905 763836 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Sebi224g00058 PC4 1.9e-23 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi224g00058 K25815 - gmx:100305633 154.066