Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi224g00045 ATGGCAGAGGAGTTCTCATTCCACACTCACAAACTGCACCTCTTACTCTTACATTGGCTATGCTTATTTTATTTCTCACTAACACTCCTCACTGTGACAGGATCACCAACGACCATGTCCATGGATCATGTGAAGCCCTCAACCCCTCTCGTTTCCTTTCTCGAACGCCTCCAAGAAACCGCATTCAAAACCTTCGGCAACTCCAACTTCGACCCCAAAACCTACGTCGACTTGCCCCTCAAGTTCAGCCTCTCCGTCACAGAGCACGCATTCCAGAACCTTCCAAAGGACGCTAACGGTTCCGTCCCTGTCGATGACTTGAAGCGGTTTCTAGAAGCTTACTTCGAAGGTGCAGGGGATGATTTGGTGTACCTTGAACCAGCGGATTTCGTGCCAGAGCCAGAGGGTTTCTTGCCCAAAGTGAAACACCCTGAGATAAGGGCGTGGGCGCTTCAGGTTCATTCCCTTTGGAAAAACTTGAGCAGGAAAATATCCAGTGAGGTGCACACCCACCCACAGTTGCATACACTGCTTCCTCTTCCAGCTTCTGTTGTCATTCCTGGTTCGCGATTTCGTGAGGTCTATTACTGGGACTCCTACTGGGTAATTAGGGGCTTGCTGGTGAGTAAAATGCATAAGACTGCTAAAGCTGTTGTCACCAATCTCATTTCCTTCATAGAGGAATATGGGTTTGTGCTTAATGGTGCTAGAGCATACTATACTAACAGGAGCCAGCCCCCCCTTTTAAGCGCTATGATTTATGAGATATACTGTAGCACTGGTGATATAGAATTAGTTAAAAGATCTCTACCTGCACTACTGAAAGAGTATGAGTTTTGGAATTCAGATATACATAAAGTGACCATTTTGGATGCTCAAGGTTGCACTCACACCTTAAATCGTTATCATGCAATGTGGAACAAACCCAGGCCAGAATCGGCCACGATGGACAAGGCATCAGCTTCCAAGTTCTCGAATGTGTCAGAAAAACAACAATTTTACCTTGACCTGGCATCAGCTGCTGAATCAGGATGGGATTTCAGCACAAGATGGATGAGAGATCCTCCTCATTTCACCACATTGTCTACAACATCAGTGATACCCGTTGATTTAAATGCATATCTACTTGGGATGGAACTTAATATTGCCTTCTTTGCAAAAGTTACTGGAGATAATAGTACTGCTGAACACTTCATGGAAATTTCTGATGCTAGAAAGAAGGCAATAAACTCTGTTTTCTGGAATTCAAACATGAAACAATGGCTTGATTACTGGCTCGAAAATAGAAACTCTGAGGAGGTTCATGTTTGGAAAACCCTGCAGCAGAATAAAAATATATTTGCTTCCAATTTTGTTCCTTTGTGGATGAAGCCATTTCACTCAGATACTTCACTTGTGGGTAGTCTTGTTGAAAGCCTCAAAACTTCTGGCCTGCTTCGTGCTGCTGGAATTGCAACTTCTTTGAGTAATTCAGGACAACAGTGGGACTTTCCAAATGGTTGGGCCCCACTTCAGCACATGCTAGTTGAAGGTCTGGTAAAATCAGGGTTGGAAGAAGCAAGGTCATTGGCTGAGGAAATTGCCATCAGATGGATCACAACGAATTATATTGTTTACAAGAAAACGGGTGTAATGCATGAAAAGTTTGATGTGGAGCATTGTGGAGAATTTGGAGGTGGGGGTGAATATGTACCCCAGACTGGTTTTGGCTGGTCGAATGGAGTTGTGTTGGCATTCTTGGAGGAGTTTGGATGGCCTCAAGATCGGAATATAAAATGCTGA 1782 0.4428 MAEEFSFHTHKLHLLLLHWLCLFYFSLTLLTVTGSPTTMSMDHVKPSTPLVSFLERLQETAFKTFGNSNFDPKTYVDLPLKFSLSVTEHAFQNLPKDANGSVPVDDLKRFLEAYFEGAGDDLVYLEPADFVPEPEGFLPKVKHPEIRAWALQVHSLWKNLSRKISSEVHTHPQLHTLLPLPASVVIPGSRFREVYYWDSYWVIRGLLVSKMHKTAKAVVTNLISFIEEYGFVLNGARAYYTNRSQPPLLSAMIYEIYCSTGDIELVKRSLPALLKEYEFWNSDIHKVTILDAQGCTHTLNRYHAMWNKPRPESATMDKASASKFSNVSEKQQFYLDLASAAESGWDFSTRWMRDPPHFTTLSTTSVIPVDLNAYLLGMELNIAFFAKVTGDNSTAEHFMEISDARKKAINSVFWNSNMKQWLDYWLENRNSEEVHVWKTLQQNKNIFASNFVPLWMKPFHSDTSLVGSLVESLKTSGLLRAAGIATSLSNSGQQWDFPNGWAPLQHMLVEGLVKSGLEEARSLAEEIAIRWITTNYIVYKKTGVMHEKFDVEHCGEFGGGGEYVPQTGFGWSNGVVLAFLEEFGWPQDRNIKC 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi224g00045 593 SUPERFAMILY Six-hairpin glycosidases 65 586 IPR008928 GO:0005975
Sebi224g00045 593 Gene3D - 60 591 IPR012341 GO:0005975
Sebi224g00045 593 PRINTS Glycosyl hydrolase family 37 signature 229 247 IPR001661 GO:0004555|GO:0005991
Sebi224g00045 593 PRINTS Glycosyl hydrolase family 37 signature 567 580 IPR001661 GO:0004555|GO:0005991
Sebi224g00045 593 PRINTS Glycosyl hydrolase family 37 signature 409 425 IPR001661 GO:0004555|GO:0005991
Sebi224g00045 593 PRINTS Glycosyl hydrolase family 37 signature 366 383 IPR001661 GO:0004555|GO:0005991
Sebi224g00045 593 PRINTS Glycosyl hydrolase family 37 signature 487 503 IPR001661 GO:0004555|GO:0005991
Sebi224g00045 593 PRINTS Glycosyl hydrolase family 37 signature 334 351 IPR001661 GO:0004555|GO:0005991
Sebi224g00045 593 PRINTS Glycosyl hydrolase family 37 signature 299 316 IPR001661 GO:0004555|GO:0005991
Sebi224g00045 593 PANTHER TREHALASE 46 591 IPR001661 GO:0004555|GO:0005991
Sebi224g00045 593 Pfam Trehalase 69 584 IPR001661 GO:0004555|GO:0005991
Sebi224g00045 593 ProSitePatterns Trehalase signature 2. 494 503 IPR018232 GO:0004555|GO:0005991
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi224g00045 Sebi-Chr224 608063 612961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi224g00045 44 593 Trehalose Biosynthesis Gene Families AT4G24040 59.206 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi224g00045 K01194 - gmx:547539 978.393