Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi224g00037 ATGGGTTACCCAGTGCTCGGTGAAAGCCTCGAGTTCCTGTCCACAGGATGGAAAGGCCATCCAGAAAAGTTCATTTTCGACCGTATGATCAAATACTCCTCCGAACTATTCAAAACATCACTACTGGGTGAGCCAGCAGTGGATGAGAATCACGTAGCAAAATTCAGGGATCCTTTCCATTTGTTGGCTGCTGGGATCATATCACTGCCTATTGACTTGCCAGGAACGCCTTTCAGCAAGGCAATTAAGGCCGCAAATTTCATCAGGAAGGAGCTTTTGAAGATCATAAGGCAGAGGAAGGTGGATTTGGGTGAAGGGAATGCATCCCCAACACAAGACATATTGTCTCACATGTTGTTGACAAGCAATGAGAATGGAGAGTTTATGAATGAACTTGATATTGCCGACAAGATTCTTGGACTTTTGATTGGAGGGCATGACACTGCGAGTGCCGCGTGCACTTTCATTGTCAAATACCTTGCCGAACTCCCTCACATTTATGATCAAGTCTATCAGGAGCAAATGGAAATTGCAAATTCAAAATCCCCAGGAGAGTTGTTGAATTGGGATGACATCAACAAGATGAGATACTCTTGGAATGTAGCCTGTGAAGTAATGAGAGTTGCTCCTCCACTCCAAGGAGGTTTCAGGGAAGCCCTTAATGACTTTATGTTCAATGGATTCTCAATTCCAAAGGGATGGAAGTTATATTGGAGTGCAAATTCAACACATAAGAACCCAGAATACTTCCCTTCTCCAGAGAAATTTGACCCAACTAGATTCGAAGGAAATGGGCCAGCTCCTTACACTTTTGTGCCATTCGGTGGAGGGCCAAGGATGTGCCCTGGAAAAGAGTATGCCCGATTGGAAATATTGGTTTTCATGCATAATTTAGTGAAGAGGTTCAAGTGGGAAAAGTTAATTCCAGATGAGAAGATTGTTGTTGATCCTTTACCAATGCCTGCGAAGGACCTCCCAATTCGCCTTTATCCTTACAGAGCCTGA 1005 0.4398 MGYPVLGESLEFLSTGWKGHPEKFIFDRMIKYSSELFKTSLLGEPAVDENHVAKFRDPFHLLAAGIISLPIDLPGTPFSKAIKAANFIRKELLKIIRQRKVDLGEGNASPTQDILSHMLLTSNENGEFMNELDIADKILGLLIGGHDTASAACTFIVKYLAELPHIYDQVYQEQMEIANSKSPGELLNWDDINKMRYSWNVACEVMRVAPPLQGGFREALNDFMFNGFSIPKGWKLYWSANSTHKNPEYFPSPEKFDPTRFEGNGPAPYTFVPFGGGPRMCPGKEYARLEILVFMHNLVKRFKWEKLIPDEKIVVDPLPMPAKDLPIRLYPYRA 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi224g00037 334 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 274 283 IPR017972 GO:0005506|GO:0016705
Sebi224g00037 334 Pfam Cytochrome P450 74 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi224g00037 334 Gene3D Cytochrome P450 1 331 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi224g00037 334 SUPERFAMILY Cytochrome P450 13 331 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi224g00037 334 PRINTS E-class P450 group I signature 239 263 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi224g00037 334 PRINTS E-class P450 group I signature 271 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi224g00037 334 PRINTS E-class P450 group I signature 133 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi224g00037 334 PRINTS E-class P450 group I signature 281 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi224g00037 334 PRINTS E-class P450 group I signature 153 179 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi224g00037 334 PANTHER CYTOCHROME P450 26 50 319 - -
Sebi224g00037 334 PRINTS P450 superfamily signature 281 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi224g00037 334 PRINTS P450 superfamily signature 272 281 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi224g00037 334 PRINTS P450 superfamily signature 200 211 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi224g00037 334 PRINTS P450 superfamily signature 144 161 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi224g00037 Sebi-Chr224 499295 504448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi224g00037 2 46 Cytochrome P450 AT5G36110 54.167 1.51e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi224g00037 K20667 - gmx:100801007 550.436