Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi224g00036 ATGATTGACCTAGGCGTCGGGTCAGTAGGACATGAATCCGGTGCACCAACGACTCCATTAGGTTCGAGTCCCATGAATATCAAAGATCTTCGCCAAAGTGCTGGATACAGCAACGTTGATATTTTTACCTATGAGGAGCTGAGGCTTGCCACAAAGCACTTTCGTCCCGATTTAATCCTGGGAGAAGGTGGCTTTGGAGTTGTATATAAAGGAGTCATAGATGATAGTGTCAGGGCAGGTTACAAATCCACGGAAGTTGCCATTAAGGAGCTTAATCGCGAAGGTTTTCAAGGCGATAGGGAATGGCTCGTCAATTTCAGTCACCCAAATCTTGTGAAGCTCATTGGATACTGCTGCGAGGATGAACACCGGTTGTTGGTCTATGAATACATGGCGAGCGGGAGCTTGGAGAGAAACATCTCTTTCGCAGTAAGCTTTGCATGA 444 0.4662 MIDLGVGSVGHESGAPTTPLGSSPMNIKDLRQSAGYSNVDIFTYEELRLATKHFRPDLILGEGGFGVVYKGVIDDSVRAGYKSTEVAIKELNREGFQGDREWLVNFSHPNLVKLIGYCCEDEHRLLVYEYMASGSLERNISFAVSFA 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi224g00036 147 SUPERFAMILY Protein kinase-like (PK-like) 36 139 IPR011009 -
Sebi224g00036 147 Pfam Protein tyrosine and serine/threonine kinase 59 139 IPR001245 GO:0004672|GO:0006468
Sebi224g00036 147 PANTHER OS01G0588500 PROTEIN-RELATED 33 139 - -
Sebi224g00036 147 MobiDBLite consensus disorder prediction 1 24 - -
Sebi224g00036 147 ProSiteProfiles Protein kinase domain profile. 54 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi224g00036 147 ProSitePatterns Protein kinases ATP-binding region signature. 60 89 IPR017441 GO:0005524
Sebi224g00036 147 FunFam Serine/threonine-protein kinase BIK1 21 130 - -
Sebi224g00036 147 Gene3D Phosphorylase Kinase; domain 1 26 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi224g00036 Sebi-Chr224 479165 479917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi224g00036 42 140 Glycoside Hydrolase AT3G07070 45.714 2.51e-24 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sebi224g00036 PK_Tyr_Ser-Thr 5.9e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi224g00036 - - gmx:100800465 226.868