Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi224g00032 ATGTCAAGATCAATTATAGAGAAGAAGCTAGGTGCAGGACGTGTGGTGGCAGTGGCAATTGAAAACAACAAAACAAGCCAATATGCAGCAAAATGGGCAGTTGACAATCTTCTTCCTAAAGACCAACATCTCTTACTAATGCATGTTAGACAAAGAGCGTCTTCCATTCCTACACCAACGGGAAACCATGTATCTGTTGATGTCAATGATGATGTGGCTAGAGCATACATGCAACAAATGGACAATGAATCCAGGGAGCTTTTTGCTTCATTTCGTGTCTTCTGCAATAGAAAGAGTATACAATGCAAAGAAGTCTTGTTGGAGGACACGGATATATCAAAGGCAATAATGGAGAGTATTAACACATATTCCATTGAGCTTTTGGTACTCGGGGCACCATCAAGGAGTGGTCTTGTCAGAAGATTTAGGACAACTGATGTTCCAAGCGTTGTGTCTAAAGGGGCACCTCAATTCTGCACTGTGTACATTATTTCCAAAGGAAAAATCTCATCTGTGAGAACTGCTACTGCTCCACTACCTAAGCCTACACCCCGTAACAATACAATGCAGCCACAGCATTTCCAGAATCCTGAGAGAATGGATACACAACTAATACGCAATGCCCCACCAAGAAGATCAGCAGAGAGGCAAGCATACATTGCTCGCAAGCAAGTGGATGAAGAGGAAATCATATCACCATTCACAAGAGCTGGACCTGGAAGGCCAATCCTGAGATCCTATGAGTCCTCAATCCCTGACTCTGATATTTCATTTGTGAGCAGTGGAAGGCCAAGTATTGATAGGATGTTCCCTTCAATGTATGATGATCTGGACTCTGGAATAGCCCCTCCTCGGCTTTCATCAGGCTCAGATTATGATGTCAGAAGCTTCGGTTCATCTTTCTCAGGTGCTAAGTCAATTGATCAGGGTGACTACTCGTTCAGTTCACAAGACAGTGGGATGTCAATGTCATCATCAAGGTTATCAAATGGGGATGATGTAGAAGCTGAAATGAGGAGACTGAGGCTAGAACTGAAGCAAACAATGGAAATGTACAGTACAGCTTGCAAGGAAGCTTTGACAGCAAAGCAGAAGACACTGGAACTTCAGCGTTGGAAACTAGAAGAACAAAGGAAATTTGAAGATGCACGATTAGCTGAAGAAACAGCATTGGCAATAGCTGAGAAGGAGAGAGCAAAATGTAAAGTAGCCATGGAGGCAGCAGAAGCATCTCGAAAATATGCAGAATTGGAAGCACATAAAAGAGTTCATGCAGAAATGAAATCCATGGGAGAATCTGAGCAGAAGAAGAAGGCAGCAGCAGCAGATAGTATTTCATTTGGTCCTGCAAGGGCTGAACTAGATCACACACCAGTTGCAATAAAAGTGTTGAAACCAGATGCAGCTCAAGGACGGTCACAGTTTCAGCAAGAGGTTGAAGTGCTAAGTTGCATAAGGCATCCAAATATGGTTCTCCTTCTTGGAGCTTGCCCTGAGTATGGTTGCCTAGTGTATGAACACATGGCTAATGGAAGCTTGGATGATTGCCTATTCCGGAGAAATAAAAACATACCAGTTCTTCCCTGGCAGTTAAGATTCCGAATTGCAGCAGAGATTGCCACTGGCCTCCTTTTCCTTCACCAGACAAAACCAGAAGCATTGGTGCACCGTGACTTAAAACCCGGAAACATTTTGCTTGACCGTAACTTTGTCAGCAAGATCAGTGATGTGGGGTTGGCCAGGCTTGTCCCTCCTTCAGTTGCAGACACTGTGACACAGTACCGCATGACAGCAACTGCTGGAACATTCTGTTACATTGACCCTGAGTACCAGCAAACGGGCATGCTAGGAATCAAATCTGATATTTACTCACTGGGAATCATGCTTCTACAGATAATAACAGCCAAGTCACCAATGGGTTTGACTCACCATGTTTCAAGAGCTATTGAGAGGGGTACTTTTGCTGAGATGCTTGATCCAGCTATTGAGGATTGGCCAGTTGAACATGCATTGCATTTTGCCAAGATTTCTCTGCAATGTGCAGAAATGAGAAGAAAAGATAGACCTGATCTTGGGAAAGTTGTATTACCTGAGCTCAACAAACTCAGAGATTTTGCTGAAGAAAACATGCCAATGATGATGATGATGTTCGGTGGTGGTGGAGGATACACTTCAAGAAATAACATGAATTTCTCACGCTCCACATTTTCCTCCTCAGTTCAAGACTCTATGAGTGAATCCCAGTCGCTGTCTGGAATGTCTGGATATGAAAGCCGATCAAGCACATCGTCAATTGGAAAAATTGAAGACGAGGAGGCACGCAGCATCAAAGCTGGTTGGTTCATGATAACATTGCAAGAGGCATCCACTTCAAAGCCGAGTTCTAGGTTAAGTTGTATTCAACTACAGGCATGGAACTCAAGAATGTATCCAGTCACAACTGATCATGACCAATTGACCATGGCAGATGGCATAAGAGCTGGAGCAGGGGAAGATGATTCTGTTTGTGAGGTTGGGATTGGTGCTGAGGGAAAAATGGGATGTGAATGGGTTGGTGAAGATGGTAAGGCTTCTGTGGAAATAGAAGGACTATTAGCAAGGGTAAGTGAAGTGAGTGGGATGGCTAAATCTGGTGTTGGGTGTTGA 2646 0.438 MSRSIIEKKLGAGRVVAVAIENNKTSQYAAKWAVDNLLPKDQHLLLMHVRQRASSIPTPTGNHVSVDVNDDVARAYMQQMDNESRELFASFRVFCNRKSIQCKEVLLEDTDISKAIMESINTYSIELLVLGAPSRSGLVRRFRTTDVPSVVSKGAPQFCTVYIISKGKISSVRTATAPLPKPTPRNNTMQPQHFQNPERMDTQLIRNAPPRRSAERQAYIARKQVDEEEIISPFTRAGPGRPILRSYESSIPDSDISFVSSGRPSIDRMFPSMYDDLDSGIAPPRLSSGSDYDVRSFGSSFSGAKSIDQGDYSFSSQDSGMSMSSSRLSNGDDVEAEMRRLRLELKQTMEMYSTACKEALTAKQKTLELQRWKLEEQRKFEDARLAEETALAIAEKERAKCKVAMEAAEASRKYAELEAHKRVHAEMKSMGESEQKKKAAAADSISFGPARAELDHTPVAIKVLKPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEHMANGSLDDCLFRRNKNIPVLPWQLRFRIAAEIATGLLFLHQTKPEALVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADTVTQYRMTATAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQIITAKSPMGLTHHVSRAIERGTFAEMLDPAIEDWPVEHALHFAKISLQCAEMRRKDRPDLGKVVLPELNKLRDFAEENMPMMMMMFGGGGGYTSRNNMNFSRSTFSSSVQDSMSESQSLSGMSGYESRSSTSSIGKIEDEEARSIKAGWFMITLQEASTSKPSSRLSCIQLQAWNSRMYPVTTDHDQLTMADGIRAGAGEDDSVCEVGIGAEGKMGCEWVGEDGKASVEIEGLLARVSEVSGMAKSGVGC 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi224g00032 881 ProSiteProfiles Protein kinase domain profile. 424 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi224g00032 881 Gene3D HUPs 14 164 IPR014729 -
Sebi224g00032 881 Coils Coil 391 411 - -
Sebi224g00032 881 CDD STK_N 15 167 - -
Sebi224g00032 881 Gene3D Transferase(Phosphotransferase) domain 1 509 715 - -
Sebi224g00032 881 MobiDBLite consensus disorder prediction 734 763 - -
Sebi224g00032 881 MobiDBLite consensus disorder prediction 734 768 - -
Sebi224g00032 881 Gene3D Phosphorylase Kinase; domain 1 450 508 - -
Sebi224g00032 881 ProSitePatterns Serine/Threonine protein kinases active-site signature. 554 566 IPR008271 GO:0004672|GO:0006468
Sebi224g00032 881 SUPERFAMILY Protein kinase-like (PK-like) 452 695 IPR011009 -
Sebi224g00032 881 MobiDBLite consensus disorder prediction 308 333 - -
Sebi224g00032 881 Pfam Protein tyrosine and serine/threonine kinase 453 694 IPR001245 GO:0004672|GO:0006468
Sebi224g00032 881 PANTHER OS02G0152300 PROTEIN 15 759 - -
Sebi224g00032 881 Coils Coil 357 377 - -
Sebi224g00032 881 MobiDBLite consensus disorder prediction 308 331 - -
Sebi224g00032 881 SMART serkin_6 450 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi224g00032 881 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 144 - -
Sebi224g00032 881 Coils Coil 331 351 - -
Sebi224g00032 881 Pfam Universal stress protein family 14 153 IPR006016 -
Sebi224g00032 881 FunFam U-box domain-containing protein 51 508 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi224g00032 Sebi-Chr224 370822 378064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi224g00032 16 710 Receptor kinase-like Gene Family AT5G35380 54.110 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Sebi224g00032 PK_Tyr_Ser-Thr 1.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi224g00032 - - gmx:100803837 1144.8