LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi224g00017	ATGAGGTTATCATCACCTGCGATTCTCTACCTTCTCATCCTCTGCGATCTACTTCTCTGTCATCCCTCATTCTCTTTCTTTGCCCTCGCCGCTAACTCAGAGCAGGAGCCGGGGATTCTCCTCCCGGAAACCAACGCAACCGCTTCCGGTAATGCCTCGCTTGCGAGATCCAACGATGATAGTTTCGCTAACATGATTGATCGGGCTCTCGAAAGGGAGTTCCCCGAAAATGAGCAGAATGAAGGTACTGATGCTGGTAGTTTCAACAACAGTGTTGCTGGGCAGCAGGCTGTTTTGGAAACTGTTGCTCGAGTTAAGTCCAAGAAAAATGAGAGCAGAGAGGAAAAGTCATTTCAGTTCCATGATGTTTTCAATTTGGATAATGAGAATCGGGCTGAGGATATGCCAACTTTAATTGATCGAAAGGACAATGTCTTTATCATATCCAATCCCAAGTCAAAGTATCCCATTCTTCAACTAGACTTAAGGTTGATATCAGATCTCGTGGTTGTTATTGTCTCTGCAACTTGTGGTGGCATTGCCTTTGCTTGTGCTGGACAACCGGTTATGACTGGATATTTACTAGCAGGATCGATCATTGGACCAGGAGGTTTGAGTTTTGTTAGTGAAATGGTCCAAGTTGAGACAGTTGCTCAATTTGGTGTCATCTTTTTGCTCTTTGCATTGGGCTTAGAGTTTTCCACAACAAAGCTTCGAGTTGTTCGAGCAGTGGCTATTCTTGGAGGTCTGCTCCAAATTTTCTTATTTATGTGCTTGTGTGGAATAACAGCTTCGTTATGTGGTGGTAAATCATCTGAAGGAATATTCGTTGGTGCATTTCTATCCATGTCTTCAACTGCAGTGGTCTTGAAATTCTTAATGGAAAGGAATAGTGTCAATGCCCTTCATGGTCAGGTTACAATTGGAACTTTGATTCTTCAGGATTGTGCTGTTGGTTTGCTCTTTGCGCTGATTCCTGTCTTGGGTGGAACATCAGGAGTTGGAAGTTTTCCAATGGTTGAGCCAATTCGCAATTTTTTTGCTGCTCTGTTCTTGGCCAGCATTGGGATGCTTATACATGTTCATTTCCTTTGGAATCATGTTGACATTTTACTGGCTGCTGTTATATTGGTGATCATTATAAAAACAATTGTAGCTGCATCTGTTGTCAAGGGGTTTGGATACAACAACAAGACTTCACTTCTCGTTGGGATGTCCCTGGCACAAATTGGGGAGTTTGCCTTTGTTCTTCTCAGCCGGGCTTCTAATCTTCATTTAGTTGAGGGAAAGTTGTATTTATTGCTCCTTGGAACAACAGCTCTCAGTCTGGTTATCTATATCCACTATGGATTGCTTGCGAGTTGCATCTGCTCGAGGGCAAACTATTGTTTCAAGCTCCACAGACCATGGGGACAAAATGAAAAGCATGATAAATGTTCCACTTCATCTGAAAAGCATGTTGAAGGGTGCGATACCATTCAGTCATATAAGCTTGCAGGGAATTCGGCTAGCCAGCATGAGTGGACCCGGTACCACCAGACACCAGTATCTTCCCGTGCAAGATTCTTGTGCATGGGTTTGAATGTTATGGCCAGTTTCTTGCAAATGGTGCAGGTGACTACACCTTTATTATTCAAGCTAATTCCTGCTGTTGTGCATCTTGGTGCATTGTTGCGGTGGTTCCCTCCTGATAGTCCATCTGAGGTTTTTGTCGTCTCAGTTGTGTTGAGGATCTTGAATATGATTGTACTCTCAGATTGCATTTAA	1767	0.4335	MRLSSPAILYLLILCDLLLCHPSFSFFALAANSEQEPGILLPETNATASGNASLARSNDDSFANMIDRALEREFPENEQNEGTDAGSFNNSVAGQQAVLETVARVKSKKNESREEKSFQFHDVFNLDNENRAEDMPTLIDRKDNVFIISNPKSKYPILQLDLRLISDLVVVIVSATCGGIAFACAGQPVMTGYLLAGSIIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAILGGLLQIFLFMCLCGITASLCGGKSSEGIFVGAFLSMSSTAVVLKFLMERNSVNALHGQVTIGTLILQDCAVGLLFALIPVLGGTSGVGSFPMVEPIRNFFAALFLASIGMLIHVHFLWNHVDILLAAVILVIIIKTIVAASVVKGFGYNNKTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVIYIHYGLLASCICSRANYCFKLHRPWGQNEKHDKCSTSSEKHVEGCDTIQSYKLAGNSASQHEWTRYHQTPVSSRARFLCMGLNVMASFLQMVQVTTPLLFKLIPAVVHLGALLRWFPPDSPSEVFVVSVVLRILNMIVLSDCI	588

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi224g00017	588	PANTHER	POTASSIUM/PROTON ANTIPORTER-RELATED	43	334	IPR045158	GO:0015386\|GO:0071805\|GO:1902600
	Sebi224g00017	588	Pfam	Sodium/hydrogen exchanger family	340	444	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600
	Sebi224g00017	588	Pfam	Sodium/hydrogen exchanger family	169	330	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600
	Sebi224g00017	588	Gene3D	-	339	452	IPR038770	-
	Sebi224g00017	588	Gene3D	-	162	338	IPR038770	-

Showing 1 to 5 of 5 entries

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi224g00017	Sebi-Chr224	199016	207679	Wgd

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi224g00017	539	569	Antiporters	AT2G19600	83.871	3.35e-10	60.8

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi224g00017	K26735		-	gmx:100788884	604.364

Showing 1 to 1 of 1 entries