Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi224g00015 ATGGGGAGGAAGTGCTCACATTGTGGAAATGTAGGCCATAATTCAAGGACCTGCAGCACAATAATATCATCATCTACTACTAGTACTGGAGGACTAATTCGCCTCTTTGGCGTGCAACTACAACAAGAACAAGAACAAGGTGACTCTTCAATATTATCATCTACCATCAAGAAATGCTTTAGCATGGACTCTTTACCGCCCTCTTCTTCATCACCATCTTCCTCAATTGGCTATCTATCCGACGGAGTTCCATGGACAGAAGAGGAGCACCGAATGTTCCTGGCAGGATTAGAGAAGCTAGGAAAAGGAGATTGGAGAGGAATCTCTAGAAACTTTGTCACTACAAGAACCCCAACTCAAGTCGCCAGCCATGCTCAAAAGTACTTTCTCAGATTGCAGCCTTCTTCTATCAATAACAAGAATAAGCAGCGACGTTCAAGTCTCTTTGACTTGCAACAAGTAGCTGATAATAAATACTCCATGGCCTCCTCATCACAAGATCAAATTCAATTACCTGCAGCTGCTCCTATCTGCAGCTGGCATCCAGCTGCAGGCAATGAAGCAGCAATAGCAGTACTGCCTGATCTGGAACTCACTCTTGCAGCTCCTAATGCTAACATGCTTGGACCAATTACCGTCACTTAA 645 0.4419 MGRKCSHCGNVGHNSRTCSTIISSSTTSTGGLIRLFGVQLQQEQEQGDSSILSSTIKKCFSMDSLPPSSSSPSSSIGYLSDGVPWTEEEHRMFLAGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRLQPSSINNKNKQRRSSLFDLQQVADNKYSMASSSQDQIQLPAAAPICSWHPAAGNEAAIAVLPDLELTLAAPNANMLGPITVT 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi224g00015 214 Gene3D - 83 134 - -
Sebi224g00015 214 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 133 IPR017930 -
Sebi224g00015 214 SMART sant 81 131 IPR001005 -
Sebi224g00015 214 ProSiteProfiles Zinc finger CCHC-type profile. 3 18 IPR001878 GO:0003676|GO:0008270
Sebi224g00015 214 FunFam transcription factor MYB1R1 83 134 - -
Sebi224g00015 214 CDD SANT 84 129 IPR001005 -
Sebi224g00015 214 PANTHER TRANSCRIPTION FACTOR KUA1 3 169 - -
Sebi224g00015 214 NCBIfam myb-like DNA-binding domain, SHAQKYF class 82 131 IPR006447 GO:0003677
Sebi224g00015 214 SUPERFAMILY Homeodomain-like 81 133 IPR009057 -
Sebi224g00015 214 ProSiteProfiles SANT domain profile. 80 133 IPR017884 -
Sebi224g00015 214 Pfam Myb-like DNA-binding domain 84 129 IPR001005 -
Sebi224g00015 214 ProSiteProfiles Myb-like domain profile. 84 129 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi224g00015 Sebi-Chr224 184568 185582 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi224g00015 Myb_DNA-binding 2.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi224g00015 - - hsyr:120201312 177.563