Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi224g00014 ATGATTGGAAAGGAGATTGAGAAGGCAACATCTAGCATTTATCCTCTACAGAATGTGTTCATTCGCAAAGTTAAGATCCTGAAAGCTCCTAAGTTTGATCTTGGGAAACTGATTGAGCATTATGGCCACTCAGAATATGTTGGTATAAAGGTGGACAGACCTGCTGATGAAACAATGGTTGAGGGAGCCACCGAAGTTGTTGGAGCTTGA 210 0.419 MIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLIEHYGHSEYVGIKVDRPADETMVEGATEVVGA 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi224g00014 69 Pfam Ribosomal S3Ae family 2 30 IPR001593 GO:0003735|GO:0005840|GO:0006412
Sebi224g00014 69 PANTHER 40S RIBOSOMAL PROTEIN S3A 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi224g00014 Sebi-Chr224 167600 168178 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi224g00014 2 69 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 77.143 1.21e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi224g00014 K02984 - gmx:100781570 116.701