Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi223g00096 ATGGCAATGCCTTGGGTTTTGCTAATTCCTAACCCAGTGCAGGATTGGAAGAATAGGGAGTCAACTTGGGTGCCTCAGAAAGCTGAAACAGTGATCAGAAAGGTGTTGATGCAGGGAGGCACATCCAACCAAGGTCGAACTGAAGAAAGAAGGGCAATCTTCGTAGAGGACAAAGGTGAGATTAACTGGTGCCAATGGGTACAATTTGAGGAGAAGCACATGGAGGCGCCCAAAGCTGCAAATAGTGGCCAGAGATCTAGTTGGGCACACCCCGTGTGTGGTGGCAGTGACACATTGTGTGAAGGTGGGGAGCTTCTTGACAGAATTTTGTCAAGGGGAGGAAAGTATACAGAGGAGGATGCCAAGGTTATAATTTTGCAGATCCTTAGCGTAGTTGCTTTTTGTCATCTTCAAGGCGTTGTGCACCAATTTCCTTTCACTTCAAGAAGTGAAAATGCTGATATGAGGCTTATTGATTTTGGTCTGTCTGACTTCATCAGGCCAGATGAACGGCTGAATGACATTGTTGGGAGTGCATATTATGTTGCACCTGAGGTCCTTCACAGGTCATATAGTCTGGAGGCAGATATATGGAGTATTGGTGTTATACCTATATCTTGTTATGTGGAAGTCGACCTTTCTGGGCACGAACAGAATCTGGAATTTTTCGTGCAGTTCTTCGAGCTGAACCTAACTTTGATTGATTTACCTTGGCCATCTGCCTCTGCAGAGGCTAAGGACTTTGTAAAAAGGCTCCTAAACAAGGACTACAGGAAAAGAATGACTGCTGTCCAAGCTCTAAGTAAGTTGATCATATCAGCTTAA 825 0.4485 MAMPWVLLIPNPVQDWKNRESTWVPQKAETVIRKVLMQGGTSNQGRTEERRAIFVEDKGEINWCQWVQFEEKHMEAPKAANSGQRSSWAHPVCGGSDTLCEGGELLDRILSRGGKYTEEDAKVIILQILSVVAFCHLQGVVHQFPFTSRSENADMRLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVIPISCYVEVDLSGHEQNLEFFVQFFELNLTLIDLPWPSASAEAKDFVKRLLNKDYRKRMTAVQALSKLIISA 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi223g00096 274 Pfam Protein kinase domain 99 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi223g00096 274 Gene3D Transferase(Phosphotransferase) domain 1 102 274 - -
Sebi223g00096 274 ProSiteProfiles Protein kinase domain profile. 1 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi223g00096 274 SUPERFAMILY Protein kinase-like (PK-like) 99 268 IPR011009 -
Sebi223g00096 274 SMART serkin_6 30 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi223g00096 274 PANTHER SERINE/THREONINE-PROTEIN KINASE 99 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi223g00096 Sebi-Chr223 1399893 1402304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi223g00096 99 268 EF-hand Containing Proteins AT2G46700 67.978 6.56e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sebi223g00096 Pkinase 2.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi223g00096 K13412 - gmx:100796256 246.899