Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi223g00083 ATGGACTTATCAGCCATGCCCAAAGCATTCTCCACCCAACATAGTTGGTATCTATCCACTCTTTCCTCTGCACTACTGTACAATACTCAAGCTACTACTACCAATACTCTTAACTCTTTTTCTTCTAAGCTTATTTATACATACACCAATGTCATGAATGGTTTCAGTGCAAGTCTGTCACCTACAGAGCTTGAAGCTCTTAAAACCTCTCCTGGTTACATTTCATCCATTCCTGATTTACCTGTCAAGCTTGACACAACCTACTCACCTCATTTCCTTGGCCTCAATCCCCACATAGGTGCATGGCCTGCTTCTGAGTTTGGCAAAGATATCATTGTTGGTTTGGTGGACACTGGAGTTTGGCCAGAGAGTGAAAGCTTCAGAGATTATGGGATGACTAAAATTCCTTCAAGATGGAAAGGCCATTGTGAAAATACCATCCAATTCAACTCATCACTTTGCAACAAGAAACTCATTGGAGCTAGGTTCTTTAACAAAGGGTTGCTTGCCAAAAACCCCAACATCACCACAATTGTGAACTCTACCCGTGACACTGAAGGTCACGGGACTCACACTTCAACCACTGCAGCTGGGAGCCAAGTTGAGGGTGCATCATACTTTGGTTATGCCTCTGGAACAGCCACAGGAATAGCTTCACAGGCAAGGGTAGCTATGTACAAGGCCCTTTGGGAAGAAGGAGCCTACACATCTGATGTAATAGCTGCAATTGATAGTGCAATATCAGATGGTGTAGATGTTCTTTCATTATCATTTGGTTTTGATGATGTCCCCTTGTACAAAGACCCTGTTGCTATAGCCACATTTGCAGCCATGGAGAAGGGTATTTTTGTGTCCACTTCAGCAGGGAATGAAGGGCCTTGGCTTAAAACTCTGCATAATGGAACACCATGGGTTATAACAGTGGCTGCTGGTACTTTAGATAGAGAATTTCATGGGACTCTTATGCTTGGCAATGGAATCCCAATCACAGGCTTGTCTCTCTATCCAGGAAAATTCTCTGCCCACCAACTTCCAATTGTTTTCATGGGTTTGTGTGACAGTGTGAAGGAACTGGCCAAAGTAAAGAGCAAGATTGTGGTGTGTGAAGACAAGAATTCAACAATTTCTGATCAAGTGTCTAATGTAGACACAGCAAAAGTTACAGGGGCTGTGTTCATAACTAACAGCACTGACAGTTCATTCTTCTTAGAGAATAGTTTTGCATCCATCATTGTTAGCCCAATGAATGGAGAAATTGTCAAAGCATACATCAAGAGTAACTCTGATTCAAAAGCAAGCATGACATTTAAGATAACAGCTTTTGGTACTAGACCAGCACCAAGTGTGGATAGTTACAGTTCTAGAGGACCATCAAATAGTTGTCCATTTGTGTTGAAACCAGACATCACAGCTCCTGGTACATCAATCTTAGCTGCATGGCCTCAAAAAGTTCCAGTGGATGAGTTAGGTTCCCATAAACTCTATAGCAACTTCAATTTGTTAAGTGGCACATCCATGGCATGCCCTCATGTTGCAGGGGTGGCAGCACTTTTAAAAGGTGCACACTCTGATTGGAGCCCTGCAGCTATTCGGTCAGCTATCATGACAACCTCGGACATGTTTGACAATACTATGGGACCCATCAAAGACATTGGTGAAGGTTACAAAACAGCTTCTCCTCTAGCATTGGGAGCTGGTTACATAAACCCCAACAGAGCCCTTGACCCTGGACTTGTTTATGATGTGGGAGTAAAAGATTATGTGAATCTTCTCTGTGCATTGAACTTCACACAGAAGAACATCACAGCCATAACTAGATCCTCTTCCAATGATTGCTCTAAACCTTCCTTGGATCTTAACTACCCTTCTTTTATTGCTTTCTTCAATGCCAACAATTCTTCTTCAGGGGCAATACAAGAATTTCAGAGAACAGTGACCAATGTTGGGGAGGGACCAACAATTTATGCTGCTAGCATTACTCCCATCAAAGGGTTCCGTGTCAATGTCATCCCCAACAAGTTGGTGTTCAAAGAGAAGAACGAGAAGCTAAGCTACAAGTTGAGGATTGAGGGTCCAATAACAAAGACCAAAGTAAAGAAAGTAGCTTTTGGGTACCTCAATTGGATGGACGTGAAGCATGTGGTGAGGAGCCCTATTGTGGTCACCACCCTCAAATTCGATTTCTAG 2187 0.4284 MDLSAMPKAFSTQHSWYLSTLSSALLYNTQATTTNTLNSFSSKLIYTYTNVMNGFSASLSPTELEALKTSPGYISSIPDLPVKLDTTYSPHFLGLNPHIGAWPASEFGKDIIVGLVDTGVWPESESFRDYGMTKIPSRWKGHCENTIQFNSSLCNKKLIGARFFNKGLLAKNPNITTIVNSTRDTEGHGTHTSTTAAGSQVEGASYFGYASGTATGIASQARVAMYKALWEEGAYTSDVIAAIDSAISDGVDVLSLSFGFDDVPLYKDPVAIATFAAMEKGIFVSTSAGNEGPWLKTLHNGTPWVITVAAGTLDREFHGTLMLGNGIPITGLSLYPGKFSAHQLPIVFMGLCDSVKELAKVKSKIVVCEDKNSTISDQVSNVDTAKVTGAVFITNSTDSSFFLENSFASIIVSPMNGEIVKAYIKSNSDSKASMTFKITAFGTRPAPSVDSYSSRGPSNSCPFVLKPDITAPGTSILAAWPQKVPVDELGSHKLYSNFNLLSGTSMACPHVAGVAALLKGAHSDWSPAAIRSAIMTTSDMFDNTMGPIKDIGEGYKTASPLALGAGYINPNRALDPGLVYDVGVKDYVNLLCALNFTQKNITAITRSSSNDCSKPSLDLNYPSFIAFFNANNSSSGAIQEFQRTVTNVGEGPTIYAASITPIKGFRVNVIPNKLVFKEKNEKLSYKLRIEGPITKTKVKKVAFGYLNWMDVKHVVRSPIVVTTLKFDF 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi223g00083 728 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 39 721 IPR045051 -
Sebi223g00083 728 Pfam Subtilase family 108 539 IPR000209 GO:0006508|GO:0008236
Sebi223g00083 728 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 85 IPR037045 -
Sebi223g00083 728 CDD PA_subtilisin_like 323 433 - -
Sebi223g00083 728 Gene3D - 591 724 - -
Sebi223g00083 728 PRINTS Subtilisin serine protease family (S8) signature 502 518 IPR015500 -
Sebi223g00083 728 PRINTS Subtilisin serine protease family (S8) signature 108 127 IPR015500 -
Sebi223g00083 728 PRINTS Subtilisin serine protease family (S8) signature 184 197 IPR015500 -
Sebi223g00083 728 Gene3D - 314 442 - -
Sebi223g00083 728 Gene3D Peptidase S8/S53 domain 110 587 IPR036852 GO:0004252|GO:0006508
Sebi223g00083 728 ProSiteProfiles Serine proteases, subtilase domain profile. 87 574 - -
Sebi223g00083 728 FunFam Subtilisin-like protease SBT1.5 110 323 - -
Sebi223g00083 728 Pfam Fibronectin type-III domain 618 721 IPR041469 -
Sebi223g00083 728 SUPERFAMILY Subtilisin-like 84 578 IPR036852 GO:0004252|GO:0006508
Sebi223g00083 728 Pfam Peptidase inhibitor I9 6 84 IPR010259 -
Sebi223g00083 728 ProSitePatterns Serine proteases, subtilase family, serine active site. 503 513 IPR023828 -
Sebi223g00083 728 CDD Peptidases_S8_3 82 539 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi223g00083 Sebi-Chr223 1095125 1097311 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi223g00083 1 710 Subtilisin-like Serine Gene Family AT5G67090 46.768 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi223g00083 - - gmx:100783026 1120.92