Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi223g00033 ATGGAGGATCCGAAGATATCGGCATACTACCAGGCGAGGATGGCTCACTTCGGCGTCGTCAGCACCGAGTGGCTCGCTCAGGCCCAGTCTGCCACTACCAACCCTCCCCCACTCCCATCATCATCCCACACCGGCGACAGCCACACCAATTTCTCTGTCATCGATGAGTTCAACACGTGGCGGAGCAACCCCGATTTAGCGGAGGCCGTCGCCGCCATTCGCGCCCTCGCCGCCGTCATCAGCTCCAGCAAGGCCTCCACCATGATGCAGCTCGAAATCGAGCTCAAAAACGCCTCCGATTCTCTCAAATCATGGGATACGACCTCTATCTCTTTGACAGCAGCCTGTGATCTGTTTATGCGATATGTGACTAGGACTTCTGCTTTGGAATATGAAGACTTCAATTCAGCTAAATCTCGCTTGATTGAACGCGCTGAAAAGTTTGGGGAAATCTCCTACAAGGCTCGCAAGATTATTGCGATGCTGAGTCAAGATTTTATATTTGATGGTTGCACCATTTTGGTTCATGGTTTTTCCAGAGTTGTCTTGGAAGTTCTTAAACTGGCCGCACAAAATAAGAAACTGTTTCGGGTCTACTGCACAGAGGGGAGACCAGACCGAACAGGTTTAAGGTTGTCCAATGAGCTGGCCAAGCTTGATGTTCCTGTGAAACTAGTAATAGACTCTGCTGTGGCATATACTATGGATGAGGTGGACATGGTATTTGTTGGGGCTGATGGAGTGGTTGAAAGTGGTGGTATAATCAACATGATGGGGACATACCAAATTGGGTTGGTTGCAAAGAGTATGAATAAGCCAGTTTATGTGGCAGCTGAAAGCTACAAGTTTGCTCGTCTTTACCCTCTAGACCAAAAGGATTTGGCCCCTGCCATACGCCCAGTTGATTTCGGTGTACCTATTCCATCCAAGGTTGAGGTTGAATGTTCTGCACGGGATTATACTCCTCCTCAATATCTGACTCTGCTTTTCACAGATTTAGGCGTTCTTACTCCATCAGTTGTTAGTGATGAGCTCATTCAGCTATACTTATAG 1053 0.4815 MEDPKISAYYQARMAHFGVVSTEWLAQAQSATTNPPPLPSSSHTGDSHTNFSVIDEFNTWRSNPDLAEAVAAIRALAAVISSSKASTMMQLEIELKNASDSLKSWDTTSISLTAACDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVHGFSRVVLEVLKLAAQNKKLFRVYCTEGRPDRTGLRLSNELAKLDVPVKLVIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIGLVAKSMNKPVYVAAESYKFARLYPLDQKDLAPAIRPVDFGVPIPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi223g00033 350 FunFam Translation initiation factor eIF-2B subunit alpha 49 151 - -
Sebi223g00033 350 Gene3D - 154 350 IPR042529 -
Sebi223g00033 350 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 18 350 - -
Sebi223g00033 350 Coils Coil 88 108 - -
Sebi223g00033 350 FunFam Translation initiation factor eIF-2B subunit alpha 154 350 - -
Sebi223g00033 350 Gene3D - 49 151 IPR042528 -
Sebi223g00033 350 Pfam Initiation factor 2 subunit family 65 338 IPR000649 GO:0044237
Sebi223g00033 350 SUPERFAMILY NagB/RpiA/CoA transferase-like 64 349 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi223g00033 Sebi-Chr223 390636 392847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi223g00033 6 350 Eukaryotic Initiation Factors Gene Family AT1G53880 81.739 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi223g00033 K03239 - gmx:102669842 589.341