Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi223g00006 ATGGCTAATGAAGGAGGCAAAAGCAGTGACTTCTATGCGATCCTGGGCTTGAATAAGGAGTGCACTGAATCAGAGCTAAGGAATGCTTATAAGAAACTTGCACTGAAATGGCACCCAGATCGTTGTTCAGCGTCCGGGAATTTGAAGTTTGTGGAAGAAGCTAAGAAGAAATTCCAGGCAATACAACAAGCCTATTCTGTTTTATCTGACTCAAACAAAAGGTTAATGTACGATGTAGGAGTCTACGACAGTGATGATGACGAAAATGGCATGGGGGACTTCTTGAATGAAATGGTCACAATGATGAGCCAGACTGGTCCAAATGAAAATGGTGAGGAGAGCTTTGAGGAGTTGCAACAGCTGTTTGAAGAGATGTTTCAAGCAGATATTGGATTAGATGGAAGCACATCTCTTTCTGCTGCTGGTTGTTCTACTTCATCTACTTACATGACTTACACTGAAAATTCTAATTCAAACAAACGCAATTCCACTGAGATGAATTTTGGGAAGGCAGAGGATTCTTCTAACTTTGATGCCAATTACCAGAACTTCTGTTTTGGGTGGGAAAAGGCATGCAAATCTGAAGACTTAGGCCTTAAATTCCCAAAAATTACATCCTCAGCCTAG 627 0.4115 MANEGGKSSDFYAILGLNKECTESELRNAYKKLALKWHPDRCSASGNLKFVEEAKKKFQAIQQAYSVLSDSNKRLMYDVGVYDSDDDENGMGDFLNEMVTMMSQTGPNENGEESFEELQQLFEEMFQADIGLDGSTSLSAAGCSTSSTYMTYTENSNSNKRNSTEMNFGKAEDSSNFDANYQNFCFGWEKACKSEDLGLKFPKITSSA 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi223g00006 208 CDD DnaJ 10 70 IPR001623 -
Sebi223g00006 208 Pfam DnaJ domain 10 78 IPR001623 -
Sebi223g00006 208 Gene3D DnaJ domain 7 135 IPR036869 -
Sebi223g00006 208 PRINTS DnaJ domain signature 53 73 IPR001623 -
Sebi223g00006 208 PRINTS DnaJ domain signature 12 30 IPR001623 -
Sebi223g00006 208 PRINTS DnaJ domain signature 73 92 IPR001623 -
Sebi223g00006 208 PRINTS DnaJ domain signature 30 45 IPR001623 -
Sebi223g00006 208 SMART dnaj_3 9 73 IPR001623 -
Sebi223g00006 208 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Sebi223g00006 208 SUPERFAMILY Chaperone J-domain 8 93 IPR036869 -
Sebi223g00006 208 PANTHER PUTATIVE, EXPRESSED-RELATED 3 184 - -
Sebi223g00006 208 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi223g00006 Sebi-Chr223 53786 56109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi223g00006 11 78 C2H2 Transcription Factor Family AT1G74250 41.176 1.93e-11 60.8