Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi222g00025 ATGGTTGGAAGCAATGAATCAATGACAAGTGATACTCTAGAGTTACAGGAACGACAAGCTTCCGTAATCTACTTAGAAGAGGATGAGGAAATCCCCTTAGAACATGGTGACGCATATTTCATTGATGAAGTAGGTGGTGGTGTATTCCTTGTTGATAATGATTGGGATGGTGAACAATCCGGAGAAGATGAACAATGGGATGAGCCTTGTACCGAAATTCCTGGTTTTGGGGATAGGGTCCCTAGATTTAGGATTGATAGTGAGGAGGATATTAAAGGGATGGACTTGAAGGCATTTAGTCCACATGAAATTGAAATGTATGACTTTGGTAGCATGGAATTGGCGTACAAGTTCTATAGTTCTTATGCAATGAGGAATGGGTTTTGTGTTAGGAAATCATCTATTGTGAGAAGCAAAAAAACAAGGGAGCCATATCAGCAAGAGTATGTTTGTAATAGAGCAGGCTTTAGACGGGACAATGGGAAAAGTGTTGAAGATATGAAACGTGAGCCTAGAGTTAATTTTAGATGTGGATGTTCTGCATTATTTCGTGTTCACATTGACTTTGTGACTTCCCGATGGTATTGTACTTGGTTTGATGATGATCACAACCATGATTTGTTGGATCCAATACACTGTGGGATGCTTCCAGCACATAGGAAGATGTCTGCTAGTGAAATAATGCAGATGAATGAAATGATGAAAGTTGGTATTAGTCCCCCTCACATTTATAGGTCATTTGCTTTGCAAGCCGGAGGTTATCAGAAAATTGGTTTTAGGAAGAAGGACTTGTATAACCAGATCCATCGTCAAAGGCGTGAGCAATGTTCAGATGCGGTGGAAGCTCTAAAATACTTGAAGGATATTGGAGGGAAGGATGGTAAGATGTACATTGAGCACACAGTTGATAGTGAAGGGAGACTCCAACATTTGTTTTGGAGTAATGGAAAGCCCAGTTTCACAGCTGAGTTAAAGAAGTGCATGTTGGGTGATTATGATTTGGATGAGTTTAGCCAAGCTTGGGATGAAATGGTCAGCAAGTATCATTTGGGGGACAATCATTGGGTCAATGCACTGTATGAGAAAAGGTCAATGTGGGCTACAGCTCATATCCGGGGTAATTTTTTTGCAGGTTTTACCACAACATCTAGATGTGAGGGACTACACTCAGAGTTGGCTAAGTTTGTGCACTCAAGGTACAACTTGACAGACTTCTTGCATCATTTTCACCATTGTTTAGAGCATATACGATTCAAAGAAAAGGAAGATGACTTCGCATCTCTACATGGGGACCCTGTGCTCCAAACCAAATACCCTTCCATTGAGAAATCTGTTGCAAAATATTTAACGAAGGAGTTGTTCATGAAATGTCGGTACTTTATAAACAAAGCAGCTGACTTTGTTGTAGTTGGTTGTTCAAAAACGCTAACAGTGTCCATTTTCACTGTTTGTAAGCGTGGAGGACGAGGCAAGGAATGGAAAGTGACACATGATGCAGGTAACAATGAATTTAAATGTGATTGCATGAGAATGGAGTCTCGGGGTTTGCCATGTGAACACCTAGTTGCTGTTCTTGTTCACTTGAGGATAAATGATCTTCCTAGGTGTTTTGTTTTGAAACGGTGGTCAAAAGGTGCGAAGGATGGTTTTTATGACCGTAATAGGGATGGAGACACTACATGGAATTCTTCACTGGTTTTTAGAAGTGATGAAGCGATGCATGTATGTAGATTGATTATTAAATTGAACGATACTGCCGAAGAACACCACGAATTTATGGAAAAGCTTTTACAAATCTATGAGGAACGCAAGGCTAGGAAATCATGCCTTCATGGGGATGGTAGTTCTTCCAGCAGGTTTGTGGTTGAAAATTTGAGGGATCCTGTATGTGTTAGGACCAAAGGTCGGGGTGGGGGAAAATCCACAACCTTAGGTCTAGCAGTGCGTAGGAGGAAAAAGTGCTCTATATGTAAGGTTCCTGGGCACAATAAGCTAACTTGTCCACACAGTCAAAGACAAGCACCATTGCATGAAAGTGAAGATGATGACATCTATTTCCCTACCCAAGACTTGGACACTGACATGATTCCTGGGCACAACCAGCACACTTGTCCACACAGTCAAAGAGAAGCACCATTGCATGAAAGTGAAGATGATGACATCTATTTCCCTACCCAAGACTTGGACACTGACATGATTCCTGGGCACAACCAGCACACTTGTCCACACAGTCAAAGAGAAGCACCATTGCATGAAAGTGAAGATGATGACATCTATTTCCCTACCCAAGACTTGGACACTGACATGGTTCCTGGGCACAATAAGCTAACTTGTCCACACAGTCAAAGACAAGCACCATTGCATGAAAGTGAAGATGATGACATCTATTTCCCTACCCAAGACTTGGACACTGACATGATTGGTAGTCATATGTCAATGTGA 2442 0.4152 MVGSNESMTSDTLELQERQASVIYLEEDEEIPLEHGDAYFIDEVGGGVFLVDNDWDGEQSGEDEQWDEPCTEIPGFGDRVPRFRIDSEEDIKGMDLKAFSPHEIEMYDFGSMELAYKFYSSYAMRNGFCVRKSSIVRSKKTREPYQQEYVCNRAGFRRDNGKSVEDMKREPRVNFRCGCSALFRVHIDFVTSRWYCTWFDDDHNHDLLDPIHCGMLPAHRKMSASEIMQMNEMMKVGISPPHIYRSFALQAGGYQKIGFRKKDLYNQIHRQRREQCSDAVEALKYLKDIGGKDGKMYIEHTVDSEGRLQHLFWSNGKPSFTAELKKCMLGDYDLDEFSQAWDEMVSKYHLGDNHWVNALYEKRSMWATAHIRGNFFAGFTTTSRCEGLHSELAKFVHSRYNLTDFLHHFHHCLEHIRFKEKEDDFASLHGDPVLQTKYPSIEKSVAKYLTKELFMKCRYFINKAADFVVVGCSKTLTVSIFTVCKRGGRGKEWKVTHDAGNNEFKCDCMRMESRGLPCEHLVAVLVHLRINDLPRCFVLKRWSKGAKDGFYDRNRDGDTTWNSSLVFRSDEAMHVCRLIIKLNDTAEEHHEFMEKLLQIYEERKARKSCLHGDGSSSSRFVVENLRDPVCVRTKGRGGGKSTTLGLAVRRRKKCSICKVPGHNKLTCPHSQRQAPLHESEDDDIYFPTQDLDTDMIPGHNQHTCPHSQREAPLHESEDDDIYFPTQDLDTDMIPGHNQHTCPHSQREAPLHESEDDDIYFPTQDLDTDMVPGHNKLTCPHSQRQAPLHESEDDDIYFPTQDLDTDMIGSHMSM 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi222g00025 813 Pfam FAR1 DNA-binding domain 117 208 IPR004330 -
Sebi222g00025 813 Coils Coil 583 603 - -
Sebi222g00025 813 SMART 26again6 504 531 IPR006564 GO:0008270
Sebi222g00025 813 ProSiteProfiles Zinc finger SWIM-type profile. 493 529 IPR007527 GO:0008270
Sebi222g00025 813 PANTHER OS01G0519700 PROTEIN 320 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi222g00025 Sebi-Chr222 1145515 1148733 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi222g00025 FAR1 7.8e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi222g00025 - - vvo:131661205 333.183