Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi221g00063 ATGGAGAGCACCGACTCATCCACCAGTTCGCAACAACCGAATCTGCCACCTGGGTTTCGGTTCCACCCCACCGATGAGGAACTTGTTGTTCACTATCTCAAGAAGAAGGTTGCCTCTGCTCCTCTCCCTGTTTCCATCATAGCTGATATTGATCTCTACAAGTTTGATCCATGGGAATTACCAGCTAAGGCATCGTTTGGAGAAGAAGAATGGTACTTTTTTAGCCCAAGGGATAGAAAATACCCAAACGGTGCAAGGCCAAACAGGGCTGCAATTTCTGGGTATTGGAAGGCTACAGGAACTGATAAGCCTGTGATGACCTCTGGTGGAACCCAAAAGGTTGGTGTGAAGAAATCTTTGGTCTTTTATGGTGGGAAGCCACCAAAAGGGGTGAAGACTCAATGGATCATGCATGAGTATCGTCTTGTTGATAACAAGCCTAACAATAAACCTCTTGGATATGACTTGGGCAACAAGAAAAACCCTCTAAGGCTGGATGATTGGGTGTTATGCCGGATCTACAAGAAGAGCTATACTACACAGAATTCTCCTATGGACCATGACAAGGATGATTCCATAGATGACATGATTAGAGGGGTACCTCCTTCAATCAATGTGGGCCAAATGAATGCGAGGTTTCACCTTTCAATGATGTCCACAAACTACAGTGCTGCATTGTTGGAAAATGACCGAAATGCTTTGGAAGGTGTGATCATAGGCAATGGTGGGATCAGCACAACAAGTTCCATATCTTCTCAGTTAGGAGCATCAAACTCAAAGGCAGAGCTTATTCCTTTTGTTTCAAATATCAATGCCTCTTCAAACACTACTACTTTAGCCTCCAAAAGAACACTATCATCACTCTATTGGAATGATGAGGATCATGTAGTTGGCACTTCATCACCTAACAAGCAGTTCAGTTTGGACAATGGTGGGAACAATGACAGTGTTGTGAATGACACTACTAATGGTTCTATTGCTACTACTCTGTTGCTTAACCAGCTCCCACAAACACCTTCATTGCACCAACAGACAATGTTGGGGTCTTTAGGAGATGGGCTACTTAGGACACCATATCAAATACAAGGGATGAATTGGTTTGGTTAA 1107 0.4354 MESTDSSTSSQQPNLPPGFRFHPTDEELVVHYLKKKVASAPLPVSIIADIDLYKFDPWELPAKASFGEEEWYFFSPRDRKYPNGARPNRAAISGYWKATGTDKPVMTSGGTQKVGVKKSLVFYGGKPPKGVKTQWIMHEYRLVDNKPNNKPLGYDLGNKKNPLRLDDWVLCRIYKKSYTTQNSPMDHDKDDSIDDMIRGVPPSINVGQMNARFHLSMMSTNYSAALLENDRNALEGVIIGNGGISTTSSISSQLGASNSKAELIPFVSNINASSNTTTLASKRTLSSLYWNDEDHVVGTSSPNKQFSLDNGGNNDSVVNDTTNGSIATTLLLNQLPQTPSLHQQTMLGSLGDGLLRTPYQIQGMNWFG 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi221g00063 368 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Sebi221g00063 368 Gene3D NAC domain 24 180 IPR036093 GO:0003677|GO:0006355
Sebi221g00063 368 MobiDBLite consensus disorder prediction 1 20 - -
Sebi221g00063 368 MobiDBLite consensus disorder prediction 1 17 - -
Sebi221g00063 368 FunFam NAC transcription factor 56 24 181 - -
Sebi221g00063 368 SUPERFAMILY NAC domain 6 176 IPR036093 GO:0003677|GO:0006355
Sebi221g00063 368 PANTHER NAC TRANSCRIPTION FACTOR 56 15 219 - -
Sebi221g00063 368 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi221g00063 Sebi-Chr221 1044843 1046234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi221g00063 1 367 NAC Transcription Factor Family AT3G15510 52.243 3.82e-120 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi221g00063 NAM 1.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi221g00063 - - vra:106763825 525.398