Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi221g00054 ATGGTGTTGATGCTAGAATTTGCCAAGTGGACACCATTTGTTCTAGCTTTTCTTCTATATGCGGGTAAGGAATCATTTGCCTCATCATTCACTCCCATTGATAATTATTTAGTAGCTTGTGGTTCATCCAACAGCATCAATTTTAAGGGTCGAACTTTCATTCCTGACTCTGAACATCCCAACGTTGAAATAATAGCCAGCACATCTATGACCATTACCTCTAAACTCACTGTCCCTTCTCCACTCTATCAATCAGCTAGACTCTTCTCAGGAAATGCATCATATCTATTCAAAATTCAACAACATGGGAGGCATTGGATCCGCCTCTATTTTCAACCTTTTCCTGATTCCAACCACAACATGACCTTTGCCTCAATAACAGTAGTCACTGATAGTTTTGTACTTCTCAATAATTTCACTTTCAAGAACTATAGTGACTCTCACTTGTTCAAAGAGTATGCAATCAACATTACATCAGATGAGTTACCTCTCACATTCATCCCACACAACAATTCACTTATCTTTGTTAATGCCATTGAAGTTGTGTCCATACCTGATGAGCTCTTCCCTGACCAAATAGTAGTGGCTGTAAATCCATCTAGCTTTTTTGAACAACTTCCAAAATCTGCCCTTGAAACAGTTTACCGGGTGAATGTAGGGGGTGCATTTCTAAGTGATGAGAATGACACCCTTGGAAGGATTTGGGAGAATGATGAAAACTACTTCCACTCAACCACTACTGCTCTTAACATTTCAACAAACCCTGCTGCAATAATGTTTCCTCCTGCTGTTACACCTTATACAGCACCACCATTAGTTTATGCCACAGCCAGAGCCATAGGGAATGCATCAGAAGGGTCCTATTTAAGTTGGGTCTTCACTATGGATCCAAACTTTCAGTATTTTGTTAGGGTGCATTTCTGTGACATAATTATCAAGTCAGTGTACACTGTGGGTTTCAATCTGTTTATAAATGGAGCATTTGCTGAGAAAAGTCTTGTCCTGTCATATTCTGTGCCATATTACACAGACTTCATCTCCCACTCCTCAGCAAACACTTTGAAAGGTTTTCATTCTAGCATAACAGGAAAAAAGAAGAGTGTTAGTGTTACTCATGATCCTAATTCTTTGCAAAGAAGTGGGAAATTGGGGGTTATAATTGGTTGCTGTGTCACTGTTTTGGTATTACTTGGGCTATCATTTTGTTACTTGAAAGCTCGCAGGTTGAAGAAGAAATCAGCAATCACTTTTGAATTTCTGAGACATTTTACTTTCCATGAAATCCAACAAGCAACCAATGATTTTGATCCTAATCTGCTTATTGGAGAAGGAGGATTTGGCAAGAGCCATGTGACAACCAATGTAAAGGGTAGCTTCGGGTATGTTGATCCTGAGTATTTTAGAACCAAGTGTCTCACTAAGAAATCAGATGTTTACTCTTTTGGGGTGGTGTTGATTGAAGTTATCTGTGGCAAGCCTGCTTTAGATGATGCTCGTCCAACTCAGCAAATGAATTTGGCATTGTGGGCATTAAGCTGTCATGGAAAGGGGACTTTCTATGAAATGATGGATCCATATTTGAGTGGAAAAGTGAATATGGATTCTCTGAAAAAGGTCTCTGAGTTGGCTTGGAAGTGCTTGGAGGAGCGTCGGGTGAACAGGCCACCAATGGGGTATGTATTGTGTGAACTTGAAGAGGCTCTCCACCTTGAGTTGGCATCACAAGTTTTGAATCATGAAGGGGACTCTGTCACCAATGCTAGTGTAGAAAATGGATTCACAGATGATATAGAAAATGTTGCCAGAAACAGGACGCCACGCCGCGACATAGAGTGGTTCGAGATGGTGGTTTTGCGTGCGACCGTGTATGATAGGGGTTGGAACGGCTCTCGCGCTAGAGTCAGAACCTGA 1911 0.4097 MVLMLEFAKWTPFVLAFLLYAGKESFASSFTPIDNYLVACGSSNSINFKGRTFIPDSEHPNVEIIASTSMTITSKLTVPSPLYQSARLFSGNASYLFKIQQHGRHWIRLYFQPFPDSNHNMTFASITVVTDSFVLLNNFTFKNYSDSHLFKEYAINITSDELPLTFIPHNNSLIFVNAIEVVSIPDELFPDQIVVAVNPSSFFEQLPKSALETVYRVNVGGAFLSDENDTLGRIWENDENYFHSTTTALNISTNPAAIMFPPAVTPYTAPPLVYATARAIGNASEGSYLSWVFTMDPNFQYFVRVHFCDIIIKSVYTVGFNLFINGAFAEKSLVLSYSVPYYTDFISHSSANTLKGFHSSITGKKKSVSVTHDPNSLQRSGKLGVIIGCCVTVLVLLGLSFCYLKARRLKKKSAITFEFLRHFTFHEIQQATNDFDPNLLIGEGGFGKSHVTTNVKGSFGYVDPEYFRTKCLTKKSDVYSFGVVLIEVICGKPALDDARPTQQMNLALWALSCHGKGTFYEMMDPYLSGKVNMDSLKKVSELAWKCLEERRVNRPPMGYVLCELEEALHLELASQVLNHEGDSVTNASVENGFTDDIENVARNRTPRRDIEWFEMVVLRATVYDRGWNGSRARVRT 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi221g00054 636 Pfam Protein tyrosine and serine/threonine kinase 451 558 IPR001245 GO:0004672|GO:0006468
Sebi221g00054 636 SUPERFAMILY Protein kinase-like (PK-like) 450 565 IPR011009 -
Sebi221g00054 636 Pfam Malectin-like domain 39 362 IPR024788 -
Sebi221g00054 636 Gene3D Transferase(Phosphotransferase) domain 1 422 587 - -
Sebi221g00054 636 FunFam Putative receptor-like protein kinase 35 185 - -
Sebi221g00054 636 Gene3D - 35 184 - -
Sebi221g00054 636 Gene3D - 209 374 - -
Sebi221g00054 636 PANTHER OS03G0124300 PROTEIN-RELATED 11 356 IPR046957 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi221g00054 Sebi-Chr221 913857 918029 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi221g00054 446 584 Receptor kinase-like Gene Family AT2G21480 52.518 2.31e-38 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi221g00054 Malectin_like 2.8e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi221g00054 - - tpra:123883851 485.723