Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi221g00053 ATGGTGATTATGCTAGAATTTACCAAGTGGACACCATTTGTTCTAGCTTTTCTTCTATACGTGGGTAAGGAATCATTTGCCACATACACTCCCGTTGATAATTATTTAGTAGCTTGTGGTTCTTCCAACAACATCAACTTTCAGGGCCGAACTTTCATTCCTGACTCTGAATATCCCAACCTTAAAATAATAGCCAACAAATCTATGACCATTACCTCTAAACTCACTGTTCCTTCTCCACTCTATCAGTCAGCTAGACTCTTCTCAGGAAATGCATCATATTTCTTCAAAATTCAACAACATGGGATGCATTGGATCCGCCTCTATTTTCACCCTTTTCCTAATTCCAACCACAACATGAACTTTGCCTCAATAACAGTAGTCACTGATAGTTTTGTACTTCTCGATTATTTCACTTTCATGAACTATAGAGACTCTCACTTGTTCAAAGAGTATGCAATCAGTGTTACATCAAATGAGTTGTTTCTCAAATTCATCTCTCACCACAATTCACTTGTCTTTGTTAATGCTATCGAAGTTGTCTCTATGCCGGATGTGCTCTTCCCTGACAATCTAAAGTCATTCACCCCTTTCACTGTACCTTCAGAATTCTTCCTTGAAACAGTTTACCGGTTGAATGTAGGAGGTGAATCTATCAGTGCTGAAAATGACACCCTTGATAGGAGTTGGGAGAGTGATGAAACTTACTTTCACTCCACCAGCACTGCTATCAACATTTCAACAAACATTTCTGCTATAAAGCATCCTGATTTTTTACCAATTACAGCACCCCCTTTAGTTTATGCTACTGCTAAAGCCTTGGGAAGTGTTTTTGCTGAGTCTAATTTAAATTGGGTTTTCCATATAAGTCCAGACTTTCTGTATTTTGTTCGGGTGCATTTCTGTGACATAATTAGCAAGTCTCCTAATTCTTTGGTTCTGAATCTATTTATAAATGGAAGGATTACTCTTGGAAATTTTGACCTGTCATCATTGTCTGGTGACCTTGCTGAGCCTTATTTCAAGGACTTTGTGTTCTACTCTTCAGGGGAAACTATGACTGTAAGTGTTGGCCCAGCTTTAATGTCTAATTATACCCTACAAAATGCAACCATGAATGGGTTGGAGATACTGAAGATAAGCAATAAATTTAGTGGTTTGGATGGCTTTTCCTCTGTTGAGAGTGTTCTTACAAAATCTTCTCAAATAAGTAAGAAAATAAAATCAGTCATTGTAATTGGTTTCAGTGTCACTGTTTTGACGTTTCTGGTATTACTTGGACTATCATTTTGTTACTTGAAGGCTCGCAGGCTGAAGAAGAAATCAGCAATCACTTTTGAATTTCTGAGACATTTTACTTTCCATGAAATCCAACAAGCAACCAATGATTTTGATCCTAATCTGCTTATTGGAGAAGGAGGATTTGGTAACGTCTATAAAGGAACACTAGAAAATGGGAAAACAGTGGCTATCAAAGTAGCAAATCCTGAATCCAGACAAGGTCTCAATGAATTCCACAACGAGATAGAGTTGTTATCTGGACTTCGTCATCAGAACCTTGTCTCTCTTGTAGGTTGCTGTAGTGAAGACTCAGAACTGATTCTAGTATACAACTTCATGGCAAATGGATCTCTTAGTAGTCATCTTTATGGGAGAGACTTTGTTCCTCTGTCATGGAAGCAACGCCTTGAAATATGCATTGGGGCTGCAAAGGGACTTTGTTATCTTCATATTGGAGCAAGGCAAGGCGTAATTCATCGTGATGTGAAGGCAGCAAACATTCTCTTGGATGAAAATCTTGTGCCAAAAGTTGCTGATTTTGGCATATCAAAGAAAGGTCCTCTTCTTGATAAGAGCCATGTGACAACCAATGTAAAGGGTAGCTTCGGGTATGTTGATCCTGAGTATTTTAGAACCAAGTATCTTACTAAGAAATCAGATGTTTACTCTTTTGGGGTGGTGTTGATTGAAGTTATCTGTGGCAAGCCTGCTTTAGATGATGCTCGTCCAACTCAGCAAATGAATTTGGCATTGTGGGCATTAAGCTGTCATGGAAAGGGGACTTTCTATGAAATGATGGATCCATATTTGAGTGGAAAAGTGAATATGGATTCTCTGAAAAAGGTCTCTGAGTTGGCTTGGAAGTGCTTGGAGGAGCGTCGGGTGAACAGGCCACCAATGGGGTATGTATTGTGTGAACTTGAAGAGGCTCTCCACCTTGAGTTGGCATCACAAGTTTTGAATCATGAAGGGGACTCTGTCACCAATGCTAGTGTAGAAAATGGATTCACAGATGATATAGAAAATGTTGCTTGA 2316 0.3903 MVIMLEFTKWTPFVLAFLLYVGKESFATYTPVDNYLVACGSSNNINFQGRTFIPDSEYPNLKIIANKSMTITSKLTVPSPLYQSARLFSGNASYFFKIQQHGMHWIRLYFHPFPNSNHNMNFASITVVTDSFVLLDYFTFMNYRDSHLFKEYAISVTSNELFLKFISHHNSLVFVNAIEVVSMPDVLFPDNLKSFTPFTVPSEFFLETVYRLNVGGESISAENDTLDRSWESDETYFHSTSTAINISTNISAIKHPDFLPITAPPLVYATAKALGSVFAESNLNWVFHISPDFLYFVRVHFCDIISKSPNSLVLNLFINGRITLGNFDLSSLSGDLAEPYFKDFVFYSSGETMTVSVGPALMSNYTLQNATMNGLEILKISNKFSGLDGFSSVESVLTKSSQISKKIKSVIVIGFSVTVLTFLVLLGLSFCYLKARRLKKKSAITFEFLRHFTFHEIQQATNDFDPNLLIGEGGFGNVYKGTLENGKTVAIKVANPESRQGLNEFHNEIELLSGLRHQNLVSLVGCCSEDSELILVYNFMANGSLSSHLYGRDFVPLSWKQRLEICIGAAKGLCYLHIGARQGVIHRDVKAANILLDENLVPKVADFGISKKGPLLDKSHVTTNVKGSFGYVDPEYFRTKYLTKKSDVYSFGVVLIEVICGKPALDDARPTQQMNLALWALSCHGKGTFYEMMDPYLSGKVNMDSLKKVSELAWKCLEERRVNRPPMGYVLCELEEALHLELASQVLNHEGDSVTNASVENGFTDDIENVA 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi221g00053 771 SUPERFAMILY Protein kinase-like (PK-like) 445 734 IPR011009 -
Sebi221g00053 771 FunFam Receptor-like protein kinase FERONIA 205 382 - -
Sebi221g00053 771 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 221 746 - -
Sebi221g00053 771 ProSitePatterns Protein kinases ATP-binding region signature. 470 492 IPR017441 GO:0005524
Sebi221g00053 771 Pfam Protein tyrosine and serine/threonine kinase 470 728 IPR001245 GO:0004672|GO:0006468
Sebi221g00053 771 Gene3D Phosphorylase Kinase; domain 1 434 539 - -
Sebi221g00053 771 Pfam Malectin-like domain 38 379 IPR024788 -
Sebi221g00053 771 FunFam receptor-like protein kinase FERONIA 432 539 - -
Sebi221g00053 771 SMART serkin_6 464 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi221g00053 771 ProSitePatterns Serine/Threonine protein kinases active-site signature. 584 596 IPR008271 GO:0004672|GO:0006468
Sebi221g00053 771 FunFam Receptor-like protein kinase FERONIA 540 756 - -
Sebi221g00053 771 Gene3D Transferase(Phosphotransferase) domain 1 540 757 - -
Sebi221g00053 771 Gene3D - 34 183 - -
Sebi221g00053 771 Gene3D - 206 382 - -
Sebi221g00053 771 ProSiteProfiles Protein kinase domain profile. 464 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi221g00053 771 FunFam Putative receptor-like protein kinase 34 184 - -
Sebi221g00053 771 CDD STKc_IRAK 470 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi221g00053 Sebi-Chr221 905608 907923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi221g00053 29 759 Receptor kinase-like Gene Family AT4G39110 42.038 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi221g00053 Malectin_like 1.6e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi221g00053 - - tpra:123883851 937.562